Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Reaction: 1.1.1.107

Superclasses: Reactions Classified By Conversion Type Simple Reactions Chemical Reactions
Reactions Classified By Substrate Small-Molecule Reactions

EC Number: 1.1.1.107

Enzymes and Genes:
3-oxoacyl-[acyl-carrier-protein] reductase : OAR1 ( Saccharomyces cerevisiae )
pyridoxal 4-dehydrogenase Inferred from experiment : pldh-t ( Mesorhizobium loti )

In Pathway: vitamin B6 degradation

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.

Most BioCyc compounds have been protonated to a reference pH value of 7.3, and some reactions have been computationally balanced for hydrogen by adding free protons. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Enzyme Commission Primary Name: pyridoxal 4-dehydrogenase

Enzyme Commission Synonyms: pyridoxal dehydrogenase

Standard Gibbs Free Energy (ΔrG in kcal/mol): -20.377228 Inferred by computational analysis [Latendresse13]

Enzyme Commission Summary:
The enzyme acts on the hemiacetal form of the substrate.

Citations: [Burg69]

Gene-Reaction Schematic: ?

Unification Links: KEGG:R01707 , Rhea:21339

Relationship Links: BRENDA:EC:1.1.1.107 , ENZYME:EC:1.1.1.107 , IUBMB-ExplorEnz:EC:1.1.1.107


References

Burg69: Burg RW, Snell EE (1969). "The bacterial oxidation of vitamin B6. VI. Pyridoxal dehydrogenase and 4-pyridoxolactonase." J Biol Chem 244(10);2585-9. PMID: 4306030

Latendresse13: Latendresse M. (2013). "Computing Gibbs Free Energy of Compounds and Reactions in MetaCyc."


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Wed Dec 17, 2014, BIOCYC13A.