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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Enzyme: guanidinobutyrase

Gene: gbuA Accession Number: G-9013 (MetaCyc)

Species: Pseudomonas aeruginosa

Subunit composition of guanidinobutyrase = [GbuA]4
         guanidinobutyrase subunit = GbuA

Summary:
The gbuA gene encoding the Pseudomonas aeruginosa guanidinobutyrase is located in an operon with the gbuR gene, encoding a regulator. The enzyme is similar to the Pseudomonas putida enzyme in having a high optimal pH and a requirement for Mn2+. However, it differs in its subunit structure, being a tetramer (the enzyme from Pseudomonas putida is a hexamer). Transcription from the gbuA gene requires binding of the GbuR regulator as well as the presence of 4-guanidinobutyrate [Nakada02]

Gene Citations: [Stover00]

Molecular Weight of Polypeptide: 34.728 kD (from nucleotide sequence), 34 kD (experimental) [Nakada02 ]

Molecular Weight of Multimer: 140 kD (experimental) [Nakada02]

Unification Links: ModBase:Q9I3S3 , Protein Model Portal:Q9I3S3 , SMR:Q9I3S3 , String:208964.PA1421 , Swiss-Model:Q9I3S3 , UniProt:Q9I3S3

Relationship Links: Entrez-Nucleotide:PART-OF:AE004571 , InterPro:IN-FAMILY:IPR005925 , InterPro:IN-FAMILY:IPR006035 , InterPro:IN-FAMILY:IPR020855 , InterPro:IN-FAMILY:IPR023696 , Panther:IN-FAMILY:PTHR11358 , PDB:Structure:3NIO , Pfam:IN-FAMILY:PF00491 , Prints:IN-FAMILY:PR00116 , Prosite:IN-FAMILY:PS01053 , Prosite:IN-FAMILY:PS51409

Gene-Reaction Schematic: ?


Enzymatic reaction of: guanidinobutyrase

EC Number: 3.5.3.7

4-guanidinobutyrate + H2O <=> urea + 4-aminobutanoate

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.

The reaction is favored in the direction shown.

In Pathways: arginine degradation IX (arginine:pyruvate transaminase pathway)

Cofactors or Prosthetic Groups: Mn2+ [Nakada02]

pH(opt): 9.5 [Nakada02]


References

Nakada02: Nakada Y, Itoh Y (2002). "Characterization and regulation of the gbuA gene, encoding guanidinobutyrase in the arginine dehydrogenase pathway of Pseudomonas aeruginosa PAO1." J Bacteriol 184(12);3377-84. PMID: 12029055

Stover00: Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV (2000). "Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen." Nature 406(6799);959-64. PMID: 10984043


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Thu Dec 18, 2014, BIOCYC13A.