Metabolic Modeling Tutorial
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BioCyc websites down
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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MetaCyc Gene-Ontology-Terms Class: GO:0006351 - transcription, DNA-templated

Synonyms: GO:0006350, GO:0061018, GO:0061022, cellular transcription, DNA-dependent, DNA-dependent transcription, transcription, DNA-dependent

Definition: The cellular synthesis of RNA on a template of DNA.

Parent Classes:
GO:0032774 - RNA biosynthetic process ,
GO:0034645 - cellular macromolecule biosynthetic process

Child Classes:
GO:0001121 - transcription from bacterial-type RNA polymerase promoter (1) ,
GO:0006366 - transcription from RNA polymerase II promoter

Parts:
GO:0006352 - DNA-templated transcription, initiation (7) ,
GO:0006353 - DNA-templated transcription, termination (2) ,
GO:0006355 - regulation of transcription, DNA-templated (54)

Term Members:
PII (glnB) ,
GlnK ,
RelB Qin prophage; antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor ,
HipB ,
MalT transcriptional activator ,
ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system ,
PurR ,
RNA polymerase, sigma 70 (sigma D) factor (rpoD) ,
PrlF antitoxin (sohA) ,
RNA polymerase, sigma 19 factor (fecI) ,
DinJ antitoxin of YafQ-DinJ toxin-antitoxin system and DNA-binding transcriptional repressor ,
MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor ,
RNA polymerase, sigma S (sigma 38) factor (rpoS) ,
RNA polymerase, sigma 24 (sigma E) factor (rpoE) ,
CysB ,
MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity (chpA) ,
RNA polymerase, sigma 32 (sigma H) factor (rpoH) ,
50S ribosomal subunit protein L4 (rplD) ,
YefM antitoxin of the YoeB-YefM toxin-antitoxin pair and DNA binding transcriptional repressor ,
RNA polymerase, sigma 28 (sigma F) factor (fliA) ,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase ,
bifunctional biotin-[acetyl-CoA-carboxylase] ligase and transcriptional repressor (birA) ,
bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon (malY) ,
fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase ,
mRNA interferase, toxin of the MqsR-MqsA toxin-antitoxin system ,
DNA gyrase, subunit B (gyrB) ,
DNA gyrase, subunit A ,
toxin of the YafQ-DinJ toxin-antitoxin system ,
Qin prophage; toxin of the RelE-RelB toxin-antitoxin system and cofactor to enhance the repressor activity of RelB ,
YhaV toxic endonuclease ,
toxin of the YoeB-YefM toxin-antitoxin pair ,
DNA topoisomerase III (topB) ,
aminopeptidase A/I (pepA) ,
Ada DNA-binding transcriptional dual regulator ,
RNA polymerase, α subunit (rpoA) ,
RNA polymerase, β' subunit (rpoC) ,
RNA polymerase, β subunit (rpoB) ,
poly(A) polymerase I (pcnB) ,
diguanylate cyclase (dosC) ,
c-di-GMP phosphodiesterase, heme-regulated (dosP) ,
MazE antitoxin of the MazF-MazE toxin-antitoxin system (chpR) ,
ArsR ,
30S ribosomal subunit protein S4 (rpsD) ,
thiaminase II (tenA) ,
thiazole tautomerase (tenI)

Unification Links: GO:0006351


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Fri Dec 19, 2014, biocyc14.