Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
twitter

MetaCyc EC 6.5.1 -- Ligases that form phosphoric-ester bonds

Parent Class: EC-Numbers6 -- Ligases6.5 -- Forming phosphoric ester bonds

Instances:
6.5.1.1 -- DNA ligase (ATP),
6.5.1.2 -- DNA ligase (NAD+),
6.5.1.3 -- RNA ligase (ATP),
6.5.1.4 -- RNA 3′-terminal-phosphate cyclase (ATP),
6.5.1.5 -- RNA 3′-terminal-phosphate cyclase (GTP),
6.5.1.6 -- DNA ligase (ATP or NAD+),
6.5.1.7 -- DNA ligase (ATP, ADP or GTP)

Unofficial Reactions:
a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end + a 3' half-tRNA molecule with a hydroxyl on its 5' end ↔ a ligated tRNA with a 2'-5' linkage,
a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end + a 3' half-tRNA molecule with a hydroxyl on its 5' end + 2 ATP + H2O → a 2'-phospho-[ligated tRNA] + AMP + ADP + diphosphate + 2 H+

Enzymes and Genes:
tRNA ligase: TRL1 ( Saccharomyces cerevisiae )
RNA 2',3'-cyclic phosphodiesterase: thpR ( Escherichia coli K-12 substr. MG1655 )


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by Pathway Tools version 19.5 (software by SRI International) on Thu Feb 11, 2016, biocyc13.