MetaCyc All-Genes Class: adaptations

The adaptation to stress was meant to cover the classical stress inducers such as osmotic pressure, temperature, starvation. The protection category was meant to cover those related to compound / chemical induced killing or stress. The defense/survival category was meant to cover virulence factors (although K-12 does not have many).

Parent Classes:
cell processes

Child Classes:
dessication (7),
Fe aquisition (19),
osmotic pressure (13),
other (mechanical, nutritional, oxidative stress) (20),
pH (7),
starvation (11),
temperature extremes (10)

cusF (copper / silver efflux system - periplasmic binding protein and metallochaperone),
dosC (diguanylate cyclase),
dosP (c-di-GMP phosphodiesterase, heme-regulated),
dsbA (protein disulfide oxidoreductase - DsbAoxidised),
pdeF (cyclic di-GMP phosphodiesterase),
pdeR (cyclic di-GMP phosphodiesterase)

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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
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