Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Compound Class: an aromatic L-amino acid

Superclasses: an amino acid or its derivative an amino acid an aromatic amino acid
an amino acid or its derivative an amino acid an L-amino acid

Instances:
β-oxo-L-tyrosine ,
γ-glutamylanilide diol ,
(2S,3S)-3-methyl-L-phenylalanine ,
(2Z)-2-amino-3-(3,4-dihydroxyphenyl)-3-hydroxyprop-2-enoate ,
(2Z)-2-amino-3-hydroxy-3-(4-hydroxyphenyl)prop-2-enoate ,
(R)-β-hydroxy-L-tyrosine ,
3-hydroxy-5-methyl-L-tyrosine ,
3-methyl-L-tyrosine ,
N5-phenyl-L-glutamine ,
hawkinsin ,
L-β-phenylalanine ,
L-histidine ,
L-homophenylalanine ,
L-phenylalanine ,
L-tryptophan ,
L-tyrosine

Reactions known to consume the compound:

prodigiosin biosynthesis :
(S)-3-acetyloctanal + an L-amino acid → 2-methyl-3-n-amyl-dihydropyrrole + a 2-oxo acid + H2O

rhizocticin A and B biosynthesis :
2-keto-5-phosphono-3-cis-pentenoate + an L-amino acidL-2-amino-5-phosphono-3-cis-pentenoate + a 2-oxo carboxylate
2-keto-4-hydroxy-5-phosphonopentanoate + an L-amino acid → 2-amino-4-hydroxy-5-phosphonopentanoate + a 2-oxo carboxylate

Not in pathways:
ATP + 2 an L-amino acid → ADP + a dipeptide + phosphate + H+

Reactions known to produce the compound:

Not in pathways:
an ester of aromatic amino acids + H2O → an aromatic amino acid + an aromatic amino acid
a peptide + H2O → a peptide + an aromatic amino acid

γ-glutamyl cycle :
an (γ-L-glutamyl)-L-amino acid → an L-amino acid + 5-oxoproline


a peptide + H2O → an L-amino acid + a peptide
a peptide + H2O → a peptide + an L-amino acid
a N-methyl L-amino acid + oxygen + H2O → an L-amino acid + formaldehyde + hydrogen peroxide
a polypeptide + H2O → a polypeptide + an L-amino acid

Reactions known to both consume and produce the compound:

Not in pathways:
an aromatic amino acid + 2-oxoglutarate ↔ an aromatic oxo-acid + L-glutamate
glyoxylate + an aromatic amino acid ↔ glycine + an aromatic oxo-acid


L-alanine + a 2-oxo carboxylate ↔ pyruvate + an L-amino acid

In Reactions of unknown directionality:

Not in pathways:
an N-acylated aromatic-L-amino acid + H2O = a carboxylate + an aromatic L-amino acid


an L-amino acid = a D-amino acid
an L-amino acid + NAD+ + H2O = a 2-oxo carboxylate + ammonium + NADH + H+
an N-carbamoyl-L-amino acid + H2O + 2 H+ = an L-amino acid + ammonium + CO2
S-ureidoglycine + a 2-oxo carboxylate = oxalurate + an L-amino acid


a 5-L-glutamyl-[peptide] + an amino acid = a 5-L-glutamyl-amino acid + a peptide

In Transport reactions:
an aromatic amino acid[cytosol]an aromatic amino acid[periplasmic space] ,
an L-amino acid[cytosol]an L-amino acid[periplasmic space]


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Wed Dec 17, 2014, biocyc13.