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Escherichia coli K-12 substr. MG1655 Polypeptide: CP4-57 prophage; predicted protein



Gene: yfjI Accession Numbers: G7360 (EcoCyc), b2625, ECK2621

Regulation Summary Diagram: ?

Summary:
No information about this protein was found by a literature search conducted on November 1, 2013.

Locations: cytosol

Map Position: [2,757,007 -> 2,758,416] (59.42 centisomes)
Length: 1410 bp / 469 aa

Molecular Weight of Polypeptide: 54.027 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0008643 , EchoBASE:EB2987 , EcoGene:EG13195 , EcoliWiki:b2625 , OU-Microarray:b2625 , PortEco:yfjI , Protein Model Portal:P52124 , RefSeq:NP_417114 , RegulonDB:G7360 , String:511145.b2625 , UniProt:P52124

Relationship Links: InterPro:IN-FAMILY:IPR025048 , Pfam:IN-FAMILY:PF13148

GO Terms:

Cellular Component: GO:0005829 - cytosol Inferred from experiment Inferred by computational analysis [DiazMejia09, Ishihama08]

MultiFun Terms: extrachromosomal prophage genes and phage related functions

Essentiality data for yfjI knockouts: ?

Growth Medium Growth? T (°C) O2 pH Osm/L Growth Observations
LB Lennox Yes 37 Aerobic 7   Yes [Baba06, Comment 1]
M9 medium with 1% glycerol Yes 37 Aerobic 7.2 0.35 Yes [Joyce06, Comment 2]
MOPS medium with 0.4% glucose Yes 37 Aerobic 7.2 0.22 Yes [Baba06, Comment 1]

Credits:
Last-Curated ? 01-Nov-2013 by Keseler I , SRI International


Gene Local Context (not to scale): ?

Transcription Unit:

Notes:

History:
Markus Krummenacker on Tue Oct 14, 1997:
Gene object created from Blattner lab Genbank (v. M52) entry.


References

Baba06: Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H (2006). "Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection." Mol Syst Biol 2;2006.0008. PMID: 16738554

DiazMejia09: Diaz-Mejia JJ, Babu M, Emili A (2009). "Computational and experimental approaches to chart the Escherichia coli cell-envelope-associated proteome and interactome." FEMS Microbiol Rev 33(1);66-97. PMID: 19054114

Ishihama08: Ishihama Y, Schmidt T, Rappsilber J, Mann M, Hartl FU, Kerner MJ, Frishman D (2008). "Protein abundance profiling of the Escherichia coli cytosol." BMC Genomics 9;102. PMID: 18304323

Joyce06: Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson BO, Agarwalla S (2006). "Experimental and computational assessment of conditionally essential genes in Escherichia coli." J Bacteriol 188(23);8259-71. PMID: 17012394


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Tue Nov 25, 2014, BIOCYC13A.