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Escherichia coli K-12 substr. MG1655 Polypeptide: predicted protein



Gene: yoaI Accession Numbers: G6974 (EcoCyc), b1788, ECK1786

Regulation Summary Diagram: ?

Regulation summary diagram for yoaI

Summary:
Expression of the predicted small protein YoaI was not detected under the conditions used by [Hemm08].

yoaI may be a member of the PhoB regulon in E. coli O157:H7 [Yoshida12a].

Locations: membrane

Map Position: [1,872,102 <- 1,872,206] (40.35 centisomes, 145°)
Length: 105 bp / 34 aa

Molecular Weight of Polypeptide: 3.772 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0005947 , EchoBASE:EB4348 , EcoGene:EG14417 , EcoliWiki:b1788 , OU-Microarray:b1788 , PortEco:yoaI , Protein Model Portal:P76239 , RefSeq:NP_416302 , RegulonDB:G6974 , String:511145.b1788 , UniProt:P76239

GO Terms:

Cellular Component: GO:0016020 - membrane Inferred by computational analysis [UniProtGOA11, UniProtGOA11a]
GO:0016021 - integral component of membrane Inferred by computational analysis [UniProtGOA11a]

Gene Class: ORFs

Credits:
Last-Curated ? 05-May-2015 by Keseler I , SRI International


Gene Local Context (not to scale): ?

Gene local context diagram

Transcription Unit:

Transcription-unit diagram

Notes:

History:
Peter D. Karp on Wed Jan 18, 2006:
Gene right-end position adjusted based on analysis performed in the 2005 E. coli annotation update [Riley06 ].
Markus Krummenacker on Tue Oct 14, 1997:
Gene object created from Blattner lab Genbank (v. M52) entry.


References

Hemm08: Hemm MR, Paul BJ, Schneider TD, Storz G, Rudd KE (2008). "Small membrane proteins found by comparative genomics and ribosome binding site models." Mol Microbiol 70(6);1487-501. PMID: 19121005

Riley06: Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL (2006). "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005." Nucleic Acids Res 34(1);1-9. PMID: 16397293

UniProtGOA11: UniProt-GOA (2011). "Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries."

UniProtGOA11a: UniProt-GOA (2011). "Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries."

Yoshida12a: Yoshida Y, Sugiyama S, Oyamada T, Yokoyama K, Makino K (2012). "Novel members of the phosphate regulon in Escherichia coli O157:H7 identified using a whole-genome shotgun approach." Gene 502(1);27-35. PMID: 22504029


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Mon Jul 6, 2015, biocyc11.