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Escherichia coli K-12 substr. MG1655 Polypeptide: conserved protein



Gene: yibG Accession Numbers: EG11763 (EcoCyc), b3596, ECK3585

Regulation Summary Diagram: ?

Regulation summary diagram for yibG

Summary:
No information about this protein was found by a literature search conducted on March 13, 2006.

Map Position: [3,766,200 -> 3,766,661] (81.17 centisomes, 292°)
Length: 462 bp / 153 aa

Molecular Weight of Polypeptide: 18.079 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0011750 , EchoBASE:EB1713 , EcoGene:EG11763 , EcoliWiki:b3596 , OU-Microarray:b3596 , PortEco:yibG , Protein Model Portal:P32106 , RefSeq:NP_418053 , RegulonDB:EG11763 , SMR:P32106 , String:511145.b3596 , UniProt:P32106

Relationship Links: InterPro:IN-FAMILY:IPR011990

Gene Class: ORFs Conserved-Hypothetical-ORFs

Essentiality data for yibG knockouts: ?

Growth Medium Growth? T (°C) O2 pH Osm/L Growth Observations
LB Lennox Yes 37 Aerobic 7   Yes [Baba06, Comment 1]
M9 medium with 1% glycerol Yes 37 Aerobic 7.2 0.35 Yes [Joyce06, Comment 2]
MOPS medium with 0.4% glucose Yes 37 Aerobic 7.2 0.22 Yes [Baba06, Comment 1]

Credits:
Last-Curated ? 13-Mar-2006 by Keseler I , SRI International


Sequence Features

Protein sequence of conserved protein with features indicated

Feature Class Location Citations Comment
Signal-Sequence 1 -> 19
[UniProt10a]
UniProt: Non-Experimental Qualifier: potential;
Chain 20 -> 153
[UniProt09]
UniProt: Uncharacterized protein yibG;


Gene Local Context (not to scale): ?

Gene local context diagram

Transcription Unit:

Transcription-unit diagram

Notes:

History:
Peter D. Karp on Thu Jan 16, 2003:
Predicted gene function revised as a result of E. coli genome reannotation by Serres et al. [Serres01 ].
10/20/97 Gene b3596 from Blattner lab Genbank (v. M52) entry merged into EcoCyc gene EG11763; confirmed by SwissProt match.


References

Baba06: Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H (2006). "Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection." Mol Syst Biol 2;2006.0008. PMID: 16738554

Joyce06: Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson BO, Agarwalla S (2006). "Experimental and computational assessment of conditionally essential genes in Escherichia coli." J Bacteriol 188(23);8259-71. PMID: 17012394

Serres01: Serres MH, Gopal S, Nahum LA, Liang P, Gaasterland T, Riley M (2001). "A functional update of the Escherichia coli K-12 genome." Genome Biol 2(9);RESEARCH0035. PMID: 11574054

UniProt09: UniProt Consortium (2009). "UniProt version 15.8 released on 2009-10-01 00:00:00." Database.

UniProt10a: UniProt Consortium (2010). "UniProt version 2010-07 released on 2010-06-15 00:00:00." Database.


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Sun Aug 30, 2015, biocyc14.