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Escherichia coli K-12 substr. MG1655 Polypeptide: predicted transposase



Gene: yhhI Accession Numbers: EG11525 (EcoCyc), b3484, ECK3469

Regulation Summary Diagram: ?

Summary:
No information about this protein was found by a literature search conducted on July 18, 2012.

Locations: cytosol

Map Position: [3,622,401 -> 3,623,537] (78.07 centisomes)
Length: 1137 bp / 378 aa

Molecular Weight of Polypeptide: 43.146 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0011377 , EchoBASE:EB1487 , EcoGene:EG11525 , EcoliWiki:b3484 , OU-Microarray:b3484 , PortEco:yhhI , Protein Model Portal:P28912 , RefSeq:NP_417941 , RegulonDB:EG11525 , String:511145.b3484 , UniProt:P28912

Relationship Links: InterPro:IN-FAMILY:IPR002559 , Pfam:IN-FAMILY:PF01609

In Paralogous Gene Group: 296 (3 members)

GO Terms:

Biological Process: GO:0006313 - transposition, DNA-mediated Inferred by computational analysis [GOA01a]
Molecular Function: GO:0003677 - DNA binding Inferred by computational analysis [GOA01a]
GO:0004803 - transposase activity Inferred by computational analysis [GOA01a]
Cellular Component: GO:0005829 - cytosol Inferred by computational analysis [DiazMejia09]

Gene Class: ORFs

Essentiality data for yhhI knockouts: ?

Growth Medium Growth? T (°C) O2 pH Osm/L Growth Observations
LB enriched Yes 37 Aerobic 6.95   Yes [Gerdes03, Comment 1]

Credits:
Last-Curated ? 18-Jul-2012 by Keseler I , SRI International


Gene Local Context (not to scale): ?

Transcription Unit:

Notes:

History:
Peter D. Karp on Thu Jan 16, 2003:
Predicted gene function revised as a result of E. coli genome reannotation by Serres et al. [Serres01 ].
1/26/1998 (pkarp) Merged genes G7974/yhhI and EG11525/yhhI


References

DiazMejia09: Diaz-Mejia JJ, Babu M, Emili A (2009). "Computational and experimental approaches to chart the Escherichia coli cell-envelope-associated proteome and interactome." FEMS Microbiol Rev 33(1);66-97. PMID: 19054114

Gerdes03: Gerdes SY, Scholle MD, Campbell JW, Balazsi G, Ravasz E, Daugherty MD, Somera AL, Kyrpides NC, Anderson I, Gelfand MS, Bhattacharya A, Kapatral V, D'Souza M, Baev MV, Grechkin Y, Mseeh F, Fonstein MY, Overbeek R, Barabasi AL, Oltvai ZN, Osterman AL (2003). "Experimental determination and system level analysis of essential genes in Escherichia coli MG1655." J Bacteriol 185(19);5673-84. PMID: 13129938

GOA01a: GOA, DDB, FB, MGI, ZFIN (2001). "Gene Ontology annotation through association of InterPro records with GO terms."

Serres01: Serres MH, Gopal S, Nahum LA, Liang P, Gaasterland T, Riley M (2001). "A functional update of the Escherichia coli K-12 genome." Genome Biol 2(9);RESEARCH0035. PMID: 11574054


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Mon Nov 24, 2014, biocyc14.