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Escherichia coli K-12 substr. MG1655 Compound Class: a UDP-sugar

Superclasses: a nucleic acid componenta base derivativea nucleotide sugaran NDP-sugar
all carbohydratesa carbohydratea glycana carbohydrate derivativea nucleotide sugaran NDP-sugar
an organic heterocyclic compoundan organonitrogen heterocyclic compounda diazinea pyrimidine


Summary:
This compound class stands for generic and unspecified UDP-sugars.

a UDP-sugar compound structure

Child Classes: a UDP-N-acetylmuramoyl-pentapeptide (2), a UDP-N-acetylmuramoyl-tetrapeptide (0), a UDP-N-acetylmuramoyl-tripeptide (1), UDP-D-glucose (1), UDP-D-xylose (0), UDP-L-arabinose (0), UDP-N-acetyl-D-galactosamine (0), UDP-N-acetyl-D-glucosamine (1), UDP-N-acetyl-D-mannosaminouronate (1)

Instances:
dihydro-UDP-N-acetylmuramate,
UDP-α-D-galactofuranose,
UDP-α-D-galactose,
UDP-α-D-glucosamine,
UDP-α-D-glucose,
UDP-α-D-glucuronate,
UDP-β-L-threo-pentapyranos-4-ulose,
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine,
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine,
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine,
UDP-4-amino-4-deoxy-β-L-arabinopyranose,
UDP-N-acetyl-α-D-glucosamine-enolpyruvate,
UDP-N-acetyl-α-D-mannosamine,
UDP-N-acetyl-α-D-muramate,
UDP-N-acetyl-α-D-muramoyl-L-alanine,
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine,
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate,
UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine,
UDP-fucose

SMILES: C1(=CC(NC(N1C2(C(C(C(O2)COP(OP(O[R1])([O-])=O)([O-])=O)O)O))=O)=O)

Unification Links: KEGG:C05227

Reactions known to consume the compound:

Not in pathways:
a UDP-sugar[periplasm] + H2O[periplasm] → UMP[periplasm] + an α-D-aldose 1-phosphate[periplasm] + 2 H+[periplasm]


References

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Cummins62a: Cummins, C.S. (1962). "Chemical composition and antigenic structure of cell walls of Corynebacterium, Mycobacterium, Nocardia, Actinomyces and Arthrobacter." J Gen Microbiol 28;35-50. PMID: 13882624

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Interschick70: Interschick, E., Fiedler, F., Schleifer, K.H., Kandler, O. (1970). "Glycine amide a constituent of the murein of Arthrobacter atrocyaneus." Z. Naturforsch 25: 714-717.

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Miller66: Miller I, Plapp R, Kandler O (1966). "The amino acid sequence of the serine containing murein of Butybacterium Rettgeri." Biochem Biophys Res Commun 25(4);415-20. PMID: 5965240

Miller68: Miller I, Plapp R, Kandler O (1968). "[Isolation and identification of a serine-containing UDP-muramyltripeptide from Butyribacterium rettgeri]." Z Naturforsch B 23(2);217-20. PMID: 4385976

Mirelman66: Mirelman D, Sharon N (1966). "Isolation and characterization of two disaccharide-peptides from lysozyme digests of Micrococcus lysodeikticus cell walls." Biochem Biophys Res Commun 24(2);237-43. PMID: 5965232

Perkins64: Perkins, H. R., Cummins, C.S. (1964). "Chemical structure of bacterial cell walls. Ornithine and 2,4-diaminobutyric acid as components of the cell walls of plant pathogenic corynebacteria." Nature 201;1105-7. PMID: 14152785

Perkins65: Perkins HR (1965). "2,6-Diamino-3-hydroxypimelic acid in microbial cell wall mucopeptide." Nature 208(13);872-3. PMID: 5870104

Perkins67: Perkins HR (1967). "The use of photolysis of dinitrophenyl-peptides in structural studies on the cell-wall mucopeptide of Corynebacterium poinsettiae." Biochem J 102(2);29C-32C. PMID: 6029599

Perkins68: Perkins HR (1968). "Cell-wall mucopeptide of Corynebacterium insidiosum and Corynebacterium sepedonicum." Biochem J 110(4);47P-48P. PMID: 5704800

Perkins71: Perkins HR (1971). "Homoserine and diaminobutyric acid in the mucopeptide-precursor-nucleotides and cell walls of some plant-pathogenic corynebacteria." Biochem J 121(3);417-23. PMID: 5119774

Plapp67: Plapp R, Kandler O (1967). "Isolation of an ornithine-containing cell wall precursor of Lactobacillus cellobiosus." Biochem Biophys Res Commun 28(2);141-5. PMID: 6035494

Plapp67a: Plapp R, Kandler O (1967). "Identification of L-ornithine and delta-aminosuccinyl ornithine in cell wall hydrolysates of Lactobacillus cellobiosus." Nature 213(78);803-4. PMID: 6031807

Schleifer67: Schleifer KH, Plapp R, Kandler O (1967). "The amino acid sequence of a glycine-containing cell wall precursor of Microbacterium lacticum." Biochem Biophys Res Commun 26(4);492-6. PMID: 6033749

Schleifer67a: Schleifer KH, Plapp R, Kandler O (1967). "Identification of threo-3-hydroxyglutamic acid in the cell wall of Microbacterium lacticum." Biochem Biophys Res Commun 28(4);566-70. PMID: 6072398

Schleifer67b: Schleifer KH, Kandler O (1967). "Micrococcus lysodeikticus: a new type of cross-linkage of the murein." Biochem Biophys Res Commun 28(6);965-72. PMID: 6064598

Schleifer68: Schleifer KH, Plapp R, Kandler O (1968). "Glycine as crosslinking bridge in the LL-diaminopimelic acid containing murein of Propionibacterium peterssonii." FEBS Lett 1(5);287-290. PMID: 11945321

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Shockman65: Shockman GD, Thompson JS, Conover MJ (1965). "Replacement of Lysine by Hydroxylysine and Its Effects on Cell Lysis in Streptococcus faecalis." J Bacteriol 90(3);575-88. PMID: 16562051


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
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