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Escherichia coli K-12 substr. MG1655 Reactions Class: Protein-Ligand-Binding-Reactions

Summary:
This class describes the noncovalent binding of a protein to a ligand (either a small molecule or another macromolecule) to form an instance of Protein-Small-Molecule-Complexes, or the reverse process in which a complex dissociates into its protein and ligand constituent parts.

Parent Classes:
Binding Reactions,
Protein-Reactions

Instances:
GlcC + glycolate = GlcC-glycolate,
YebK + 2-dehydro-3-deoxy-D-gluconate 6-phosphate = YebK-2-dehydro-3-deoxy-D-gluconate 6-phosphate,
Fur + Fe2+ = Fur-Fe+2,
MetJ + adenine = MetJ-adenine,
MetJ + S-methyl-5'-thioadenosine = MetJ-MTA,
ChbR + N,N'-diacetylchitobiose 6'-phosphate = ChbR-N-monoacetylchitobiose-6-phosphate,
ModE + molybdate = ModE-MoO42-,
ArgR + L-arginine = ArgR-arg,
ComR + Cu+ = ComR-Cu(I),
allantoin + AllR = AllR-allantoin,
DksA + ppGpp = DksA-ppGpp,
YqjI + Ni2+ = YqjI-nickel,
CaiF + L-carnitine = CaiF-L-carnitine DNA-binding Transcriptional Activator,
NrdR + Zn2+ = NrdR-Zn2+ DNA-binding transcriptional repressor,
GcvA + glycine = GcvA-gly,
Mlc + EIICBGlc = DgsA-EII,
RutR + thymine = RutR-thymine,
GlpR + glycerol = GlpR-glycerol,
TreR + α,α-trehalose 6-phosphate = TreR-trehalose 6-phosphate,
AcrR + ethidium = AcrR-ethidium,
MurR + N-acetyl-β-muramate 6-phosphate = MurR-N-acetylmuramate 6-phosphate,
selenocysteyl-tRNA-specific translation elongation factor + L-selenocysteinyl-tRNAsec = SelB-L-selenocysteinyl-tRNAsec,
CytR + cytidine = CytR-cytidine,
Dan + L-tartrate = Dan-L-tartrate DNA-binding transcriptional activator,
NsrR + nitric oxide = NsrR-nitric oxide,
MetR + L-homocysteine = MetR-L-homocysteine,
NsrR + nitric oxide = NsrR-nitric oxide,
MurR + N-acetyl-β-muramate 6-phosphate = MurR-MurNAc-6-P,
MprA + carbonylcyanide m-chlorophenylhydrazone = MprA-CCCP,
MprA + 2,4-dinitrophenol = MprA-2,4-dinitrophenol,
ArsR + antimonite ion = ArsR-antimonite,
ArsR + arsenite = ArsR-arsenite,
AsnC + L-asparagine = AsnC-L-asparagine,
PaaX + phenylacetyl-CoA = PaaX-phenylacetyl-CoA,
NemR + methylglyoxal = NemR-methylglyoxal,
IlvY + (S)-2-acetolactate = IlvY DNA-binding transcriptional dual regulator,
DsdC + D-serine = DsdC DNA-binding transcriptional dual regulator,
CueR + Cu+ = CueR-Cu(I),
MntR + Mn2+ = MntR-Mn2+,
LldR + (S)-lactate = LldR transcriptional repressor,
XapR + xanthosine = XapR transcriptional activator,
Zur + Zn2+ = Zur transcriptional repressor,
ZntR + Zn2+ = ZntR transcriptional activator,
ArgP + L-arginine = ArgP transcriptional activator,
ArgP + L-lysine = ArgP-lysine,
RutR + uracil = RutR-uracil,
FucR + L-fuculose 1-phosphate = FucR transcriptional activator,
Fur + Fe2+ = Fur-Fe+2,
RcnR + Co2+ = RcnR-Co2+,
RcnR + Ni2+ = RcnR-nickel,
IclR + glyoxylate = IclR-glyox,
IclR + pyruvate = IclR transcriptional repressor,
alanyl-tRNA synthetase + L-alanine = AlaS-L-alanine,
MtlR + D-mannitol = MtlR-mannitol,
PrpR + (2S,3S)-2-methylcitrate = PrpR DNA-binding transcriptional dual regulator,
N-acetylneuraminate + NanR = NanR-NANA,
N-acetyl-D-glucosamine 6-phosphate + NagC = NagC-NAcGlc-6-P,
AllS + (S)-(+)-allantoin = AllS transcriptional activator,
AllR + glyoxylate = AllR-glyox,
Fhl + formate = FhlA,
UlaR + L-ascorbate 6-phosphate = UlaR-L-ascorbate-6P,
D-fructuronate + UxuR = UxuR-fructuronate,
HcaR + 3-phenylpropanoate = HcaR transcriptional dual regulator,
NikR + Ni2+ = NikR-Ni transcriptional repressor,
CysB + O-acetyl-L-serine = CysB transcriptional dual regulator,
CynR + cyanate = CynR-Cyanate,
TyrR + L-tyrosine = TyrR-tyr,
AraC + α-L-arabinopyranose = AraC-arabinose,
MelR + melibiose = MelR-melibiose,
DnaA + ATP = DnaA-ATP,
PdhR + pyruvate = PdhR-pyruvate,
MarR + salicylate = MarR-salicylate,
IclR + phosphoenolpyruvate = IclR-PEP,
BetI + choline = BetI-choline,
L-tryptophan + TrpR = TrpR-trp,
RhaS + α-L-rhamnopyranose = RhaS-rhamnose,
RhaR + α-L-rhamnopyranose = RhaR-rhamnose,
MhpR + 3-(3-hydroxyphenyl)propanoate = MhpR transcriptional activator,
PurR + hypoxanthine = PurR-hypoxanthine,
NhaR + Na+ = NhaR-Na+,
MetJ + S-adenosyl-L-methionine = MetJ-S-adenosylmethionine,
GutR + D-sorbitol = GutR-sorbitol,
ArgR + L-arginine = ArgR-arg,
IdnR + 5-dehydro-D-gluconate = IdnR transcriptional regulator,
Crp + cyclic-AMP = CRP-cAMP DNA-binding transcriptional dual regulator,
XylR + α-D-xylopyranose = XylR-xylose,
Lrp + L-leucine = Lrp-leu,
GcvR + glycine = GcvR-gly,
Cbl + adenosine 5'-phosphosulfate = Cbl-APS,
TyrR + L-phenylalanine = TyrR-phe,
LacI + allolactose = LacI-allolactose,
MalT + maltotriose + ATP = MalT-maltotriose-ATP,
D-ribose + RbsR = RbsR-ribose,
GntR + D-gluconate = GntR-gluconate,
GlpR + sn-glycerol 3-phosphate = GlpR-glycerol-3-phosphate,
GalS + β-D-galactose = GalS-galactose,
GalR + β-D-galactose = GalR-galactose,
Cra + fructose 1,6-bisphosphate = Cra-fructose-1,6-bisphosphate,
Cra + β-D-fructofuranose 1-phosphate = Cra-fructose-1-phosphate,
FadR + an acyl-CoA = FadR-acyl-CoA,
BirA + biotinyl-5'-adenylate = BirA-bio-5'-AMP,
TorR + CPS-53 (KpLE1) prophage; prophage CPS-53 recombination directionality factor and response regulator inhibitor = TorR-TorI


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 19.5 (software by SRI International) on Thu May 5, 2016, biocyc14.