Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
twitter

Escherichia coli K-12 substr. MG1655 Protein Class: a modified protein

Summary:
This class describes proteins that have been covalently modified, such as by the addition of a phosphate group.

Child Classes: (R)-β-hydroxy-L-tyrosine-S-[NovH protein] (0) , (S)-2-methylbutanoyl-[2-methylbutanoate polyketide synthase] (0) , 2'-hydroxy-β-oxo-L-tyrosine-S-[NovH protein] (0) , a methylated corrinoid protein (0) , a palmitoylglycoprotein (0) , a (3S)-3-hydroxy-L-asparagine-HIF α subunit (0) , a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA-[acp] (0) , a 2,3-dehydro-decanoyl-HmqF (0) , a 3,4-DHB-AsbD protein (0) , a 4-(γ-L-glutamylamino)-(S)-2-hydroxy-butanoyl-[BtrI acyl-carrier protein] (0) , a 4-(γ-L-glutamylamino)butanoyl-[BtrI acyl-carrier protein] (0) , a 4-amino butanoyl-[BtrI acyl-carrier protein] (0) , a 5-L-glutamyl-[peptide] (0) , a 5-oxoprolyl-peptide (0) , a biotinylated [BCCP dimer] (1) , a biotinylated [BCCP monomer] (1) , a caldesmon phosphate (0) , a carboxy-adenylated small subunit of molybdopterin synthase (0) , a carboxy-adenylated-[ThiS sulfur-carrier protein] (1) , a carboxyadenylated CysO sulfur-carrier protein (0) , a carboxylated-biotinylated [BCCP dimer] (1) , a cell division inhibitor SulA (0) , a citryl-[holo citrate lyase acyl-carrier protein] (0) , a cleaved angiotensinogen (0) , a cleaved PqqA peptide C-terminus (0) , a cleaved PqqA peptide N-terminus (0) , a cleaved synthetic tetradecapeptide renin (0) , a cleaved type IV prepillin (0) , a decanoyl-HmqF protein (0) , a degradation product of SulA (0) , a diacylglycerol prolipoprotein (0) , a factor Va (0) , a factor VIIa (0) , a factor VIIIa (0) , a factor IXa (0) , a factor Xa (0) , a factor XIa (0) , a glucosyl-glycogenin (0) , a glycoprotein (0) , a holo aryl-carrier protein (0) , a holo carbon monoxide dehydrogenase (0) , a holo [3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)] (0) , a holo-AsbD protein (0) , a holo-[acyl-carrier protein] (1) , a hydroxymethylglutaryl-CoA reductase (NADPH) phosphate (0) , a large subunit of hydrogenase 3 (0) , a lipoprotein (0) , a lysosomal-enzyme N-acetyl-D-glucosaminyl-phospho-D-mannose (0) , a lysosomal-enzyme-D-mannose (0) , a malonyl-[holo malonate decarboxylase acyl-carrier protein] (0) , a mature P17 matrix (0) , a mature small ubiquitin-like modifier (SUMO) peptide (0) , a metarhodopsin II (0) , a methylated protein (0) , a methylated ribosomal protein L11 (0) , a modified pks13 polyketide synthase (0) , a myosin-heavy chain-phosphate (0) , a N-formylmethionyl peptide (0) , a p24 capsid protein (0) , a palmitoylated protein (0) , a phosphoprotein (0) , a phosphorhodopsin (0) , a phosphorylated pyruvate kinase (0) , a polyketide-[acp] (0) , a PqqA peptide (0) , a PqqA peptide with linked Glu-Tyr residues (0) , a protein with correct disulfide bonds (0) , a protein with incorrect disulfide bonds (0) , a protein with LPXTG motif (0) , a protein with NXTN motif (0) , a protein with sequence GKFKK (0) , a protein with sequence SGFRK-NH2 (0) , a protein with sequence SGVFTQ (0) , a protein with sequence SGVTFQGKFKK (0) , a protein with sequence TSAVLQSGFRK-NH2 (0) , a protein with-sequence TSAVLQ (0) , a protein-α-D-glucosyl-1,2-β-D-galactosyl-L-hydroxylysine (0) , a protein-β-D-galactosyl-L-hydroxylysine (0) , a proteoglycan (0) , a reduced electron-transferring flavoprotein (0) , a renin-2 heavy chain (0) , a renin-2 light chain (0) , a rhodopsin (0) , a rhodopsin Rh1 (0) , a SpoIVB peptidase (0) , a sulfurated [MtaB protein] (0) , a sulfurylated sulfur-binding protein (0) , a sulfurylated sulfur-carrier protein ThiF (0) , a thiocarboxy-adenylated-[ThiS-Protein] (0) , a thiocarboxylated small subunit of molybdopterin synthase (0) , a thiocarboxylated [CysO sulfur-carrier protein] (0) , a ThiS-ThiF acyl-disulfide (1) , a ThiS-ThiI acyl-disulfide (0) , a trans-4-hydroxy-L-proline-HIF α subunit (0) , a uridylylated PII protein (1) , a [citrate-lyase] (citryl form) (0) , a [Co(II) dimethylamine-specific corrinoid protein] (0) , a [Co(II) methylamine-specific corrinoid protein] (0) , a [Co(II) trimethylamine-specific corrinoid protein] (0) , a [CysO sulfur-carrier protein]-S-L-cysteine (0) , a [formate C acetyltransferase]-glycin -2-yl radical (0) , a [formate C acetyltransferase]-glycine (0) , a [methionine synthase]-cob(I)alamin (0) , a [methionine synthase]-cob(II)alamin (0) , a [protein]-N6-(3-O-phospho-D-ribulosyl)-L-lysine (0) , a [protein]-N6-(O3)-phospho-D-erythrulosyl-L-lysine (0) , a [protein]-N6-(O3)-phospho-D-psicosyl-L-lysine (0) , a [protein]-N6-(O3-phospho-D-erythrulosyl-L-lysine (0) , a [protein]-N6-D-erythrulosyl-L-lysine (0) , a [protein]-N6-D-erythrulosyl-L-lysine (0) , a [protein]-N6-D-psicosyl-L-lysine (0) , a [protein]-N6-D-ribulosyl-L-lysine (0) , a [pyruvate,phosphate dikinase]-phosphate (0) , acrosin (0) , activated complement subcomponent C1s (0) , active clotting enzyme (0) , ADP-D-ribosyl-(dinitrogen reductase) (0) , α-D-mannosyl-(1→6)-α-D-mannosyl-R (0) , an 11-cis retinol-[cellular-retinol-binding-protein] (0) , an 11-cis-retinal-[interphotoreceptor retinoid-binding protein] (0) , an 11-cis-retinal-[retinal-binding protein] (0) , an 11-cis-retinol-[retinal-binding protein] (0) , an acetyl-[holo citrate lyase acyl-carrier protein] (1) , an acetyl-[holo malonate decarboxylase acyl-carrier protein] (0) , an activated factor B (0) , an activated protein C (0) , an active TNF-α (0) , an acyl-protein thioester (2) , an acyl-[acyl-carrier protein] (2) , an all-trans retinal-[cellular-retinol-binding-protein] (0) , an all-trans retinol-[cellular-retinol-binding-protein] (0) , an all-trans-3-hydroxyretinol-[retinoid-binding protein] (0) , an all-trans-retinal-[retinal-binding protein] (0) , an all-trans-retinol-(plasma-retinol-binding-protein) (0) , an archaeal flagellin (0) , an iron-sulfur protein (4) , an L-glutamyl-[BtrI acyl-carrier protein] (0) , an N-acylated peptide (0) , an Nα-acetyl-peptide (0) , an oxidized cytochrome c550 (0) , an oxidized cytochrome cL (0) , an oxidized electron-transfer flavoprotein (0) , an oxidized ferredoxin (1) , an oxidized flavodoxin (2) , an oxidized flavoprotein (0) , an oxidized glutaredoxin (2) , an oxidized nitrogenase (0) , an oxidized nitrogenase-reductase (0) , an oxidized plastocyanin (0) , an oxidized putidaredoxin (0) , an oxidized rubredoxin (0) , an oxidized thioredoxin (2) , an oxidized transferrin (0) , an S-sulfanyl-[L-cysteine desulfurase] (0) , an S-sulfanyl-[ThiI sulfur-carrier protein] (0) , an [acetyl-CoA carboxylase] phosphate (0) , an [Fe-S cluster biosynthesis chaperone]-ATP (0) , an [FeS cluster biosynthesis chaperone]-ADP (0) , β aspartyl peptide (0) , β-oxo-L-tyrosine-S-[NovH protein] (0) , citramalate lyase, active (0) , cleaved flavivirus polyprotein (0) , cleaved helper component proteinase (0) , cleaved repressor LexA (0) , cleaved synaptobrevin (0) , cleaved togavirus structural polyprotein (0) , Glc-β-EGF-like domain (0) , L-tyrosine-S-[NovH protein] (0) , mature pro-interleukin-1β (0) , N-acetyl-β-D-glucosaminyl-(1→2)-α-D-mannosyl-(1→3)-α-D-mannosyl-R (0) , N-acetyl-β-D-glucosaminyl-(1→2)-[N-acetyl-β-D-glucosaminyl-(1→4)]-α-D-mannosyl-(1→3)-β-D-mannosyl-R (0) , O-β-D-GlcNAc-fucosyl-protein (0) , phospho-ERK (0) , phospho-MEK (0) , picornavirus polyprotein fragment (0) , poliovirus polyprotein fragment (0) , potyvirus polyprotein fragments (0) , smaller subunit of tyrosine aminotransferase (0) , Xyl-α(1-3)-Glc-β-EGF-like domain (0) , Xyl-α(1-3)-Xyl-α(1-3)-Glc-β-EGF-like domain (0) , [a biotinylated MadF protein] (0) , [a carboxylated biotinylated MadF protein] (0) , [a holo citrate lyase acyl-carrier protein] (2) , [a pyruvate, water dikinase]-phosphate (0) , [a SoxZY protein]-S-thiocysteine (0) , [a SoxZY protein]-thiocysteine-sulfate (0) , [DsrEFH complex] persulfide (0) , [myelin proteolipid] (0) , [SoxZY]-S-thiocysteine-sulfate (0)

Instances:
α cleavage product of IaaA ,
α cleavage product of SpeD ,
β cleavage product of IaaA ,
β cleavage product of SpeD ,
β-glucoside PTS permease BglF - cys24 phosphorylated (cryptic) ,
β-hydroxy-cis-Δ5-dodecenoyl-ACP ,
β-keto-cis-Δ5-dodecenoyl-ACP ,
γ-glutamyltranspeptidase, large subunit ,
γ-glutamyltranspeptidase, small subunit ,
(3R)-3-hydroxyoctanoyl-ACP ,
2-hexadecenoyl-ACP ,
2-ketobutyrate formate-lyase / pyruvate formate-lyase 4 ,
2-octenoyl-ACP ,
3R-3-hydroxybutanoyl-ACP ,
50S ribosomal subunit protein L7 ,
a phosphoprotein ,
AceF-dihydrolipoate ,
AceF-lipoate ,
AceF-S-acetyldihydrolipoate ,
adenylyl-[glutamine synthetase] ,
ArcA-Phosphorylated DNA-binding transcriptional dual regulator ,
ArcB sensory histidine kinase - asp576 phosphorylated ,
ArcB sensory histidine kinase - his292 phosphorylated ,
ArcB sensory histidine kinase - his717 phosphorylated ,
aryl carrier protein / L-seryl-AMP synthase ,
aryl-EntB ,
AtoC-phosphorylated DNA-binding transcriptional activator ,
AtoS sensory histidine kinase - phosphorylated ,
BaeR-Phosphorylated DNA-binding transcriptional activator ,
BaeS sensory histidine kinase - phosphorylated ,
BarA sensory histidine kinase - asp718 phosphorylated ,
BarA sensory histidine kinase - his 861phosphorylated ,
BarA sensory histidine kinase - his302 phosphorylated ,
BasR-Phosphorylated transcriptional regulator ,
BasS sensory histidine kinase - phosphorylated ,
BglG - his101 phosphorylated ,
BglG - his208 phosphorylated ,
biotinylated biotin-carboxyl carrier protein ,
but-2-enoyl-ACP ,
carboxybiotin-carboxyl-carrier protein ,
CheA(L) sensory histidine kinase - phosphorylated ,
CheB-Pasp ,
CheY-acetylated ,
CheY-Pasp ,
cis-Δ3-decenoyl-ACP ,
cis-Δ5-dodecenoyl-ACP ,
cis-3,4-dehydrodecanoyl-ACP ,
citrate lyase ,
CpxA sensory histidine kinase - phosphorylated ,
CpxR-Phosphorylated ,
CreB-Phosphorylated DNA-binding transcriptional regulator ,
CreC sensory histidine kinase - phosphorylated ,
CusR-Pasp DNA binding transcriptional activator ,
CusS sensory histidine kinase - phosphorylated ,
Dan ,
DcuR ,
DcuS sensory histidine kinase - phosphorylated ,
DpiA-Pasp DNA-binding transcriptional dual regulator ,
DpiB sensory histidine kinase - phosphorylated ,
DsbGoxidized ,
EntB isochorismatase / aryl-carrier protein ,
EnvZ sensory histidine kinase - phosphorylated ,
EvgA-Phosphorylated DNA-binding transcriptional activator ,
EvgS sensory histidine kinase - asp1009 phosphorylated ,
EvgS sensory histidine kinase - his721 phosphorylated ,
EvgS sensory histidine kinase - his1137 phosphorylated ,
FruB - his299 phosphorylated ,
GlrK sensory histidine kinase - phosphorylated ,
GlrR-Pasp56 DNA binding transcriptional activator ,
holo-[acyl-carrier protein] ,
HPr - phosphorylated ,
HypE-S-carboxamide ,
isocitrate dehydrogenase-P ,
KdpD sensory histidine kinase - phosphorylated ,
KdpE-Phosphorylated ,
lipoyl-GcvH-protein ,
MoaD-S ,
Modified BarA sensory histidine kinase ,
Modified EnvZ ,
NarL-Phosphorylated DNA-binding transcriptional dual regulator ,
NarP-Phosphorylated DNA-binding transcriptional dual regulator ,
NarQ sensory histidine kinase - phosphorylated ,
NarX sensory histidine kinase - phosphorylated ,
Npr phosphorylated ,
NtrB sensory histidine kinase - phosphorylated ,
NtrC-Phosphorylated DNA-binding transcriptional dual regulator ,
NtrC-phosphorylated monomer ,
OmpR-Phosphorylated ,
OmpR-Phosphorylated DNA-binding transcriptional dual regulator ,
oxidized ferredoxin ,
oxidized flavodoxin 1 ,
oxidized flavodoxin 2 ,
oxidized flavorubredoxin ,
oxidized glutaredoxin 1 ,
oxidized glutaredoxin 2 ,
oxidized glutaredoxin 3 ,
oxidized ribonucleoside-triphosphate reductase ,
oxidized thioredoxin ,
oxidized thioredoxin 2 ,
PanD α cleavage product ,
PanD β cleavage product ,
PhoB-Phosphorylated DNA-binding transcriptional dual regulator ,
PhoP-Phosphorylated DNA-binding transcriptional dual regulator ,
PhoQ sensory histidine kinase - phosphorylated ,
PhoR sensory histidine kinase - phosphorylated ,
phosphatidylserine decarboxylase, α subunit ,
phosphatidylserine decarboxylase, β subunit ,
phosphoglycerol transferase II ,
phosphorylated serine/threonine kinase HipA ,
protein chain elongation factor EF-P, β-lysyl-Lys34 ,
protein disulfide isomerase/protein disulfide oxidoreductase - DsbCoxidised ,
protein disulfide oxidoreductase - DsbAoxidised ,
protein disulfide oxidoreductase - DsbBoxidised ,
protein disulfide oxidoreductase - DsbDoxidized ,
PtsI - his 189 phosphorylated ,
PtsN-phosphorylated ,
PtsP-phosphorylated ,
pyruvate formate-lyase / 2-ketobutyrate formate-lyase ,
QseB-Phosphorylated DNA-binding transcriptional activator ,
QseC sensory histidine kinase - phosphorylated ,
R-3-hydroxypalmitoyl-ACP ,
RcsB-P-phosphate ,
RcsB-Pasp56 ,
RcsC sensory histidine kinase - asp875 phosphorylated ,
RcsC sensory histidine kinase - his 479 phosphorylated ,
RcsD-Phis ,
RssB-P ,
RstA-Phosphorylated DNA-binding transcriptional regulator ,
RstB sensory histidine kinase - phosphorylated ,
SucB-dihydrolipoate ,
SucB-lipoate ,
SucB-S-succinyldihydrolipoate ,
succ-ACP ,
Tapgln ,
Tapglu-Me ,
Tapglu ,
Targln ,
Targlu-Me ,
Targlu ,
TorR-Phosphorylated DNA-binding transcriptional dual regulator ,
TorR-TorI ,
TorS sensory histidine kinase - asp723 phosphorylated ,
TorS sensory histidine kinase - his443 phosphorylated ,
TorS sensory histidine kinase - his850 phosphorylated ,
TorT-TMAO ,
trans-Δ3-cis-Δ5-dodecenoyl-ACP ,
Trggln ,
Trgglu-Me ,
Trgglu ,
Tsrgln ,
Tsrglu-Me ,
Tsrglu ,
UhpA-Phosphorylated ,
UhpB sensory histidine kinase - phosphorylated ,
UhpC-glucose-6-P ,
uridylyl-[GlnK] ,
UvrY- Phosphorylated transcriptional regulator ,
YbdA sensory histidine kinase - his371 phosphorylated ,
YehT-Phosphorylated DNA-binding transcriptional activator ,
YehU sensory histidine kinase - his382 phosphorylated ,
YpdB-phosphorylated DNA binding transcriptional activator ,
ZraR-Phosphorylated DNA-binding transcriptional activator ,
ZraS sensory histidine kinase - phosphorylated


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Tue Nov 25, 2014, biocyc13.