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BioCyc websites MAYBE down
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for maintenance.
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discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0030288 - outer membrane-bounded periplasmic space

Synonyms: outer membrane bounded periplasmic space, outer membrane-enclosed periplasmic space

Definition: The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall.

Parent Classes:
GO:0044462 - external encapsulating structure part ,
GO:0042597 - periplasmic space

Part Of:
GO:0030313 - cell envelope

Parts:
GO:0031236 - extrinsic component of periplasmic side of plasma membrane (1)

Term Members:
alkyl sulfatase (yjcS) ,
conserved protein (bsmA) ,
formate dehydrogenase H (fdhF) ,
NrfG ,
predicted lipoprotein (yjbF) ,
predicted cytochrome C peroxidase (yhjA) ,
biotin sulfoxide reductase (bisC) ,
colicin M resistance protein (cbrA) ,
arylsulfatase (aslA) ,
formate dehydrogenase-O, α subunit (fdoG) ,
DegS serine endoprotease ,
glycoside hydrolase (ygjK) ,
adenine glycosylase; G.C --> T.A transversions (mutY) ,
conserved protein (yggE) ,
predicted protein (ygdR) ,
putative lipoprotein (ygdI) ,
membrane-bound lytic murein transglycosylase F (mltF) ,
nitric oxide dioxygenase (hmp) ,
hydrogenase 4, component H (hyfH) ,
penicillin binding protein 4B (yfeW) ,
YpdI colanic acid synthesis lipoprotein ,
predicted protein (yfdX) ,
predicted thiamine biosynthesis lipoprotein (apbE) ,
ferredoxin-type protein (napF) ,
galactose ABC transporter - periplasmic binding protein (mglB) ,
conserved protein (yehR) ,
predicted assembly protein AsmA ,
L,D-transpeptidase ErfK ,
conserved protein (yedX) ,
flagellar protein (flhE) ,
predicted protein (yebF) ,
conserved protein (yobA) ,
NlpC-putative lipoprotein hydrolase ,
L,D-transpeptidase YnhG ,
murein DD-endopeptidase MepH ,
oxidoreductase subunit (ynfF) ,
oxidoreductase subunit (ynfE) ,
stress response protein (ydeI) ,
Autoinducer-2 ABC transporter - periplasmic binding protein (lsrB) ,
acid resistance protein (ydeP) ,
putative sulfatase (ydeN) ,
predicted lipoprotein (yddW) ,
YdcS ,
predicted lipoprotein (ydcL) ,
predicted protein (ydbJ) ,
OsmB osmotically inducible lipoprotein ,
e14 prophage; conserved protein (ymfQ) ,
L,D-transpeptidase YcfS ,
FlgJ ,
flagellar basal-body rod protein FlgC ,
flagellar basal-body rod protein FlgB ,
flagellar biosynthesis; assembly of basal-body periplasmic P ring (flgA) ,
hydrogenase 1, large subunit (hyaB) ,
protein involved in base analog detoxification (ycbX) ,
aliphatic sulfonate ABC transporter - periplasmic binding protein (ssuA) ,
putrescine ABC transporter - periplasmic binding protein (potF) ,
IaaA ,
predicted protein (ybfP) ,
predicted lipoprotein (ybfN) ,
glutamate / aspartate ABC transporter - periplasmic binding protein (gltI) ,
outer membrane lipopolysaccharide transport and assembly complex - LptE subunit ,
predicted protein (ybcH) ,
predicted outer membrane lipoprotein (ybaY) ,
predicted lipoprotein (yajI) ,
DD-endopeptidase / DD-carboxypeptidase (ampH) ,
taurine ABC transporter - periplasmic binding protein (tauA) ,
predicted aminopeptidase (yafT) ,
predicted lipoprotein (yaeF) ,
outer membrane lipoprotein NlpE, involved in surface sensing ,
iron (III) hydroxamate ABC transporter - periplasmic binding protein (fhuD) ,
hypothetical protein (apaG) ,
multiple antibiotic resistance protein (marB) ,
DsbC monomer ,
DsbGreduced ,
predicted periplasmic pilin chaperone (yqiH) ,
predicted periplasmic pilus chaperone (yfcS) ,
E. coli common pilus chaperone - cryptic (ecpE) ,
predicted pilin chaperone, periplasmic (sfmC) ,
predicted periplasmic pilin chaperone (elfD) ,
putative fimbrial chaperone (ybgP) ,
YhdW ,
predicted pilin chaperone (yraI) ,
predicted periplasmic pilin chaperone (ycbF) ,
molybdate ABC transporter - periplasmic binding protein (modA) ,
protoheme IX ABC transporter - ATP binding subunit (ccmA) ,
putative fimbrial chaperone (yehC) ,
probable pilin chaperone similar to PapD (yadV) ,
periplasmic chaperone, required for type 1 fimbriae (fimC) ,
thiamin ABC transporter - periplasmic binding protein (tbpA) ,
L-arginine ABC transporter - periplasmic binding protein (artJ) ,
periplasmic binding protein ArtI ,
predicted periplasmic chaperone protein (yhcA) ,
phosphonate ABC transporter - periplasmic binding protein (phnD) ,
quinoprotein glucose dehydrogenase (gcd) ,
MepA ,
histidine ABC transporter - periplasmic binding protein (hisJ) ,
glutamine ABC transporter - periplasmic binding protein (glnH) ,
periplasmic cystine-binding protein; member of extracellular bacterial solute-binding protein family III (fliY) ,
curli secretion channel (csgG) ,
AphA monomer ,
branched chain amino acid ABC transporter - periplasmic binding protein (livJ) ,
flagellar P-ring protein FlgI ,
lysine / arginine / ornithine ABC transporter - periplasmic binding protein (argT) ,
leucine ABC transporter - periplasmic binding protein (livK) ,
TonB energy transducing system - TonB subunit ,
β-lactamase; penicillin resistance (ampC) ,
LptC ,
periplasmic protein associated with repression of competance (ybaV) ,
protease III (ptrA) ,
chaperone/protease involved in the maintenance of OM integrity (bepA) ,
periplasmic nitrate reductase ,
3-phytase / glucose-1-phosphatase ,
hydrogenase 2 ,
protein disulfide isomerase/protein disulfide oxidoreductase - DsbCreduced ,
inhibitor of vertebrate C-type lysozyme ,
HdeA dimer, inactive form of acid-resistance protein ,
ferric coprogen outer membrane transport complex ,
EfeB dimer ,
aldehyde dehydrogenase ,
multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 ,
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) ,
murein DD-endopeptidase, penicillin-insensitive ,
serine protease Do ,
EmrKY-TolC multidrug efflux transport system ,
EmrAB-TolC multidrug efflux transport system ,
ferric dicitrate transport system ,
ferric enterobactin transport system ,
ferric citrate outer membrane transport complex ,
vitamin B12 outer membrane transport complex ,
acid phosphatase ,
arginine decarboxylase, biosynthetic ,
asparaginase II ,
copper-containing amine oxidase ,
periplasmic sensory protein associated with the TorRS two-component regulatory system (torT) ,
AcrAB-TolC multidrug efflux system - membrane fusion protein ,
formate-dependent nitrite reductase - penta-heme cytochrome c (nrfB) ,
formate dependent nitrite reductase - NrfA subunit ,
UDP-sugar hydrolase / 5'-ribonucleotidase / 5'-deoxyribonucleotidase (ushA) ,
trimethylamine N-oxide reductase, catalytic subunit (torA) ,
Pgi ,
ferredoxin-type protein (napG) ,
subunit of periplasmic nitrate reductase, cytochrome c550 protein (napB) ,
large subunit of periplasmic nitrate reductase, molybdoprotein (napA) ,
hydrogenase 2 4Fe-4S ferredoxin-type component (hybA) ,
Agp ,
regulator of the Cpx response and possible chaperone involved in resistance to extracytoplasmic stress (cpxP) ,
peptidyl-prolyl cis-trans isomerase; in protein folding (fkpA) ,
serine endoprotease, periplasmic (degQ) ,
stress-induced protein (ygiW) ,
N-acetylmuramyl-L-alanine amidase (amiC) ,
rseB ,
YphF ,
trimethylamine N-oxide reductase III, TorZ subunit ,
Spy ,
acid shock protein (asr) ,
murein tripeptide ABC transporter OppBCDFMppA - periplasmic binding protein ,
hemolysin E (hlyE) ,
inhibitor of g-type lysozyme (pliG) ,
conserved periplasmic protein (efeO) ,
L,D-transpeptidase YbiS ,
copper / silver efflux system - membrane fusion protein (cusB) ,
copper / silver efflux system - periplasmic binding protein and metallochaperone (cusF) ,
DLP12 prophage; periplasmic protein (ybcL) ,
aldehyde dehydrogenase, Fe-S subunit (paoA) ,
aldehyde dehydrogenase, FAD-binding subunit (paoB) ,
aldehyde dehydrogenase: molybdenum cofactor-binding subunit (paoC) ,
inhibitor of vertebrate C-type lysozyme (ivy) ,
formate dehydrogenase N, α subunit (fdnG) ,
predicted periplasmic protein (ybgF) ,
vitamin B12 ABC transporter - periplasmic binding protein (btuF) ,
multicopper oxidase with role in copper homeostasis (cueO) ,
EnvC divisome associated factor, activator of peptidoglycan hydrolases ,
penicillin-binding protein 7 (pbpG) ,
β-D-glucoside glucohydrolase, periplasmic (bglX) ,
zinc homeostasis protein (zraP) ,
periplasmic protein associated with synthesis of osmoregulated periplasmic glucans (OPGs) (opgG) ,
predicted protein (yceI) ,
heme-containing peroxidase/deferrochelatase (efeB) ,
acid stress chaperone (hdeB) ,
hyperosmotically inducible periplasmic protein (osmY) ,
DNA-specific endonuclease I (endA) ,
endochitinase (chiA) ,
secretion monitor that regulates SecA translation (General Secretory Pathway) (secM) ,
RNase I, cleaves phosphodiester bond between any two nucleotides ,
thiosulfate sulfurtransferase (pspE) ,
maltose regulon periplasmic protein (malM) ,
murein lipoprotein (lpp) ,
alkaline phosphatase isozyme conversion protein (iap) ,
regulator of FtsH protease (hflK) ,
regulator of FtsH protease (hflC) ,
γ-glutamyltranspeptidase (ggt) ,
ecotin monomer; serine protease inhibitor ,
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase (cpdB) ,
SpeA ,
AppA ,
TynA ,
PhoA ,
galactofuranose / galactopyranose ABC transporter - periplasmic binding protein (ytfQ) ,
glutathione ABC transporter - periplasmic binding protein (gsiB) ,
D-allose ABC transporter - periplasmic binding protein (alsB) ,
LptA ,
predicted transporter subunit (ygiS) ,
peptide ABC transporter - periplasmic binding protein (yejA) ,
OsmF ,
YddS (ddpA) ,
YcjN ,
xylose ABC transporter - periplasmic binding protein (xylF) ,
glycerol-3-phosphate ABC transporter - periplasmic binding protein (ugpB) ,
periplasmic binding protein SapA of predicted ABC transporter ,
ribose ABC transporter - putative periplasmic binding protein (rbsB) ,
phosphate ABC transporter - periplasmic binding protein (pstS) ,
glycine betaine / proline ABC transporter - periplasmic binding protein (proX) ,
peptide ABC transporter - periplasmic binding protein (oppA) ,
nickel ABC transporter - periplasmic binding protein (nikA) ,
L-methionine / D-methionine ABC transporter - periplasmic binding protein (metQ) ,
maltose ABC transporter - periplasmic binding protein (malE) ,
ferric enterobactin ABC transporter - periplasmic binding protein (fepB) ,
ferric dicitrate ABC transporter - periplasmic binding protein (fecB) ,
membrane anchored periplasmic heme chaperone CcmE ,
arabinose ABC transporter - periplasmic binding protein (araF) ,
Zn2+ ABC transporter - periplasmic binding protein (znuA) ,
YhdZ ,
phosphoglycerol transferase II (opgB) ,
periplasmic protein (gltF) ,
tail-specific protease (prc) ,
dipeptidyl carboxypeptidase II (dcp) ,
MdtABC-TolC multidrug efflux transport system - putative membrane fusion protein ,
D-Ala-D-Ala dipeptidase (ddpX) ,
hydrogenase 2, large subunit (hybC) ,
SOS cell division inhibitor (sulA) ,
conserved protein (yncE) ,
AnsB ,
acid-resistance protein, possible chaperone (hdeA) ,
periplasmic protein involved in nickel/cobalt efflux (rcnB) ,
γ-glutamyltranspeptidase ,
periplasmic trehalase (treA) ,
reductase (yedY) ,
DegP ,
periplasmic chaperone (skp) ,
peptidyl-prolyl cis-trans isomerase (PPIase) (surA) ,
probable 9-O-acetyl-N-acetylneuraminate esterase (nanS) ,
MlaC ,
superoxide dismutase (Cu-Zn) (sodC) ,
TolB ,
soluble lytic murein transglycosylase (slt) ,
meso-diaminopimelic acid-D-alanyl endopeptidase / D-alanyl-D-alanine carboxypeptidase (dacB) ,
predicted 4Fe-4S ferredoxin-type protein (ydhX) ,
dipeptide ABC transporter - periplasmic binding protein (dppA) ,
periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer (lolA) ,
2,3-diketo-L-gulonate:Na+ symporter - periplasmic binding protein (yiaO) ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein CysP ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp ,
putrescine / spermidine ABC transporter - periplasmic binding protein (potD) ,
protein disulfide oxidoreductase - DsbAreduced ,
CcmG ,
N-acetylneuraminate mutarotase (nanM) ,
TesA ,
cadmium-induced cadmium binding protein (zinT) ,
cell division protein required during stress conditions (ftsP) ,
glucan biosynthesis protein D (opgD) ,
TorT-TMAO ,
aldose sugar dehydrogenase (yliI) ,
peptidyl-prolyl cis-trans isomerase A (rotamase A) (ppiA) ,
α-amylase (malS)

Unification Links: GO:0030288


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Fri Dec 26, 2014, biocyc11.