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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0006310 - DNA recombination

Definition: Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.

Parent Classes:
GO:0006259 - DNA metabolic process

Child Classes:
GO:0000725 - recombinational repair (8) ,
GO:0006313 - transposition, DNA-mediated (55) ,
GO:0042150 - plasmid recombination (4)

Parts:
GO:0071139 - resolution of recombination intermediates (2)

Term Members:
ssDNA-binding protein (ssb) ,
IS1 protein InsB (insB-4) ,
recombinase, DNA renaturation (recT) ,
ATP-dependent dsDNA exonuclease (sbcC) ,
transposase of IS30 (insI-1) ,
IS3 element protein InsE (insE-1) ,
IS1 protein InsB (insB-2) ,
IS1 protein InsA (insA-2) ,
IS1 protein InsA (insA-1) ,
CP4-44 prophage; IS5 transposase and trans-activator (insH-6) ,
site-specific tyrosine recombinase (xerC) ,
Holliday junction nuclease; resolution of structures; repair (ruvC) ,
branch migration of Holliday structures; repair helicase (ruvB) ,
branch migration of Holliday structures; repair (ruvA) ,
ArgR ,
protein used in recombination and DNA repair (recN) ,
predicted protein (yncM) ,
DLP12 prophage; predicted recombinase (ybcK) ,
CP4-6 prophage; DNA-binding protein (yagL) ,
RecJ ,
predicted IS186/IS421 transposase (insL-3) ,
IS186/IS421 transposase (insL-1) ,
IS2 element protein InsA (insC-1) ,
IS1 protein InsB (insB-1) ,
CP4-6 prophage; IS5 transposase and trans-activator (insH-1) ,
DNA topoisomerase III (topB) ,
IS186/IS421 transposase (insL-2) ,
KpLE2 phage-like element; IS30 transposase (insI-3) ,
transposase of IS30 (insI-2) ,
IS3 element protein InsF (insF-1) ,
IS3 element protein InsE (insE-5) ,
IS3 element protein InsE (insE-4) ,
DLP12 prophage; IS3 element protein InsE (insE-3) ,
IS3 element protein InsE (insE-2) ,
IS2 element protein (insD-1) ,
KpLE2 phage-like element; IS2 insertion element repressor InsA (insC-6) ,
IS2 insertion element repressor InsA (insC-5) ,
IS2 insertion element repressor InsA (insC-4) ,
CP4-44 prophage; IS2 insertion element repressor InsA (insC-3) ,
IS2 insertion element repressor InsA (insC-2) ,
IS1 protein InsA (insA-6) ,
IS1 protein InsA (insA-5) ,
IS1 protein InsA (insA-4) ,
IS1 protein InsA (insA-3) ,
IS5 transposase and trans-activator (insH-11) ,
IS5 transposase and trans-activator (insH-10) ,
IS5 transposase and trans-activator (insH-9) ,
IS5 transposase and trans-activator (insH-8) ,
IS5 transposase and trans-activator (insH-7) ,
IS5 transposase and trans-activator (insH-4) ,
IS5 transposase and trans-activator (insH-3) ,
DLP12 prophage; IS5 transposase and trans-activator (insH-2) ,
REP-associated tyrosine transposase (rayT) ,
Qin prophage; predicted transposase (insD) ,
predicted transposase (ydcM) ,
primosome factor N' (priA) ,
RecBCD ,
KpLE2 phage-like element; partial transposase (insO-2) ,
prophage excisionase and response regulator inhibitor (torI) ,
Qin prophage; predicted site-specific recombinase (pinQ) ,
predicted invertase fragment (pinH) ,
CPZ-55 prophage; predicted integrase (intZ) ,
predicted defective phage integrase (intG) ,
Qin prophage; predicted defective integrase (intQ) ,
predicted protein (yncI) ,
Rac prophage; IS5 transposase and trans-activator (insH-5) ,
Rac prophage; predicted integrase (intR) ,
e14 prophage; predicted excisionase (xisE) ,
e14 prophage; predicted integrase ,
CP4-6 prophage; partial regulator of insertion element IS911A (insN-1) ,
CP4-6 prophage; predicted phage integrase (intF) ,
KpLE2 phage-like element; predicted integrase (intB) ,
KpLE2 phage-like element; partial regulator of insertion element IS911B (interrupted) (insN-2) ,
CPS-53 (KpLE1) prophage; prophage CPS-53 integrase (intS) ,
nucleoid-associated protein RdgC ,
CP4-57 prophage; integrase (intA) ,
ATP-dependent helicase (dinG) ,
RecG DNA helicase ,
DLP12 prophage; predicted integrase (intD) ,
IS150 conserved protein InsB (insK) ,
KpLE2 phage-like element; IS1 repressor protein InsA (insA-7) ,
ATP-dependent dsDNA exonuclease (sbcD) ,
endodeoxyribonuclease RUS (Holliday junction resolvase) (rusA) ,
predicted recombination limiting protein (rmuC) ,
Rac prophage; predicted site-specific recombinase (pinR) ,
IS1 predicted transposase (insG) ,
e14 prophage; site-specific DNA recombinase (pinE) ,
integration host factor (IHF), β subunit (ihfB) ,
integration host factor (IHF), α subunit (ihfA) ,
predicted transcription antitermination factor (yqgF) ,
recombination factor (rarA) ,
site-specific recombinase (xerD) ,
recombination and repair (recR) ,
ATP-dependent DNA helicase (recQ) ,
protein interacts with RecR and possibly RecF proteins (recO) ,
RecD ,
RecC ,
RecB ,
DNA strand exchange and recombination protein with protease and nuclease activity (recA) ,
DNA helicase IV (helD) ,
regulator for fimA (fimE) ,
regulator for fimA (fimB)

Unification Links: GO:0006310


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Fri Nov 28, 2014, biocyc12.