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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0005622 - intracellular

Synonyms: internal to cell, protoplasm

Definition: The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Parent Classes:
GO:0044464 - cell part

Part Of:
GO:0005623 - cell

GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane (15),
GO:0044424 - intracellular part (2656),
GO:0009366 - enterobactin synthetase complex (4),
GO:0045252 - oxoglutarate dehydrogenase complex (3),
GO:0043229 - intracellular organelle (90),
GO:0030529 - ribonucleoprotein complex (84),
GO:0009289 - pilus (40),
GO:0005737 - cytoplasm (1044)

Term Members:
twin arginine protein translocation system - TatB protein,
twin arginine protein translocation system - TatC protein,
predicted transcriptional regulator (yqeI),
putative transcriptional regulator (ygeV),
predicted protein (ygeL),
predicted DNA-binding transcriptional regulator (ygeK),
AtoS monomer,
DpiB sensory histidine kinase,
CusS sensory histidine kinase,
diguanylate cyclase (dgcM),
predicted sensory kinase in two-component regulatory system with YedW (yedV),
c-di-GMP phosphodiesterase, heme-regulated (dosP),
DhaR DNA-binding transcriptional dual regulator,
HyfR DNA-binding transcriptional activator,
RcsF outer membrane lipoprotein - activates the Rcs pathway during envelope stress,
imidazole glycerol phosphate synthase, HisF subunit,
imidazole glycerol phosphate synthase, HisH subunit,
GlrK sensory histidine kinase,
QseC sensory histidine kinase,
RcsD phosphotransferase,
TorS monomer,
predicted diguanylate cyclase (dgcE),
RtcR DNA-binding transcriptional activator,
NorR DNA-binding transcriptional dual regulator,
EvgS sensory histidine kinase,
BaeS sensory histidine kinase,
BasS sensory histidine kinase,
GTPase that interacts with methylmalonyl-CoA mutase (argK),
CadC DNA-binding transcriptional activator,
PhoQ monomer,
RstB sensory histidine kinase,
ZraS sensory histidine kinase,
RcsC sensory histidine kinase,
regulator of RpoS (rssB),
DcuS sensory histidine kinase,
BarA sensory histidine kinase,
ArcB sensory histidine kinase,
CpxA sensory histidine kinase,
YehU sensory histidine kinase,
YpdA sensory histidine kinase,
50S ribosomal subunit protein L35 (rpmI),
inner membrane protein sensing glucose-6-phosphate (uhpC),
UhpB sensory histidine kinase,
N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (hisA),
50S ribosomal subunit protein L21 (rplU),
30S ribosomal subunit protein S21 (rpsU),
predicted enzyme (yggS),
30S ribosomal subunit protein S14 (rpsN),
50S ribosomal subunit protein L5 (rplE),
50S ribosomal subunit protein L22 (rplV),
50S ribosomal subunit protein L2 (rplB),
aminopeptidase B (pepB),
GTPase, involved in modification of U34 in tRNA (mnmE),
ATP-dependent DNA helicase (recQ),
cobalamin-dependent methionine synthase,
elongation factor Tu (tufA),
30S ribosomal subunit protein S15 (rpsO),
30S ribosomal subunit protein S2 (rpsB),
30S ribosomal subunit protein S13 (rpsM),
30S ribosomal subunit protein S11 (rpsK),
30S ribosomal subunit protein S10 (rpsJ),
protein chain elongation factor EF-Ts (tsf),
elongation factor G (fusA),
acetate kinase (ackA),
GTP-binding protein (era),
predicted DNA-binding transcriptional regulator (ydjF),
DNA-binding transcriptional regulator (yciT),
aminopeptidase A/I (pepA),
predicted DNA-binding transcriptional regulator, DEOR-type (ygbI),
CP4-57 prophage; predicted DNA-binding transcriptional regulator (yfjR),
KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (sgcR),
protein-glutamine N-methyltransferase (prmB),
predicted DNA-binding transcriptional regulator (yihW),
GutR DNA-binding transcriptional repressor (srlR),
propionate kinase (tdcD),
elongation factor Tu (tufB),
50S ribosomal subunit protein L6 (rplF),
50S ribosomal subunit protein L23 (rplW),
50S ribosomal subunit protein L16 (rplP),
GlpR DNA-binding transcriptional repressor,
FucR transcriptional activator,
DeoR DNA-binding transcriptional repressor,
AgaR DNA-binding transcriptional repressor,
CRP transcriptional dual regulator,
predicted DNA-binding transcriptional regulator (ybaO),
Lrp transcriptional dual regulator,
H-NS-like DNA-binding protein with RNA chaperone activity (stpA),
H-NS DNA-binding transcriptional dual regulator (hns),
UlaR DNA-binding transcriptional repressor,
30S ribosomal subunit protein S4 (rpsD),
50S ribosomal subunit protein L10 (rplJ),
protein chain initiation factor IF2 (infB),
RNase D (rnd),
exonuclease III (xthA),
NtrB (glnL)

Unification Links: GO:0005622

Relationship Links: Wikipedia:RELATED-TO:Intracellular

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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 19.5 (software by SRI International) on Fri Apr 29, 2016, biocyc14.