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Metabolic Modeling Tutorial
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BioCyc websites MAYBE down
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0005524 - ATP binding

Definition: Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Parent Classes:
GO:0032550 - purine ribonucleoside binding ,
GO:0032559 - adenyl ribonucleotide binding ,
GO:0035639 - purine ribonucleoside triphosphate binding

Term Members:
GroEL-GroES chaperonin complex ,
tRNA threonylcarbamoyladenosine dehydratase (tcdA) ,
SbmA ,
predicted protein kinase involved in ubiquinone biosynthesis (ubiB) ,
predicted synthetase/amidase with ATPase activity (yjfC) ,
predicted enzyme with ATPase activity (ygiC) ,
putative ATP-dependent protease (ycbZ) ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaE) ,
ribosome-binding ATPase, inhibitor of catalase activity (ychF) ,
ATP synthase F1 complex - gamma subunit (atpG) ,
ATP synthase F1 complex - epsilon subunit (atpC) ,
conserved protein (yqeC) ,
conserved protein (yoeF) ,
Rac prophage; predicted DNA replication protein (ydaV) ,
peptidyl-lysine acetyltransferase (pka) ,
conserved protein (yegI) ,
CP4-57 prophage; conserved protein; mutations lead to radiation resistance (yfjK) ,
Zn2+ ABC transporter - membrane subunit (znuB) ,
predicted ATP-dependent helicase (yejH) ,
predicted transporter subunit: ATP-binding component of ABC superfamily (yehL) ,
thiamin ABC transporter - periplasmic binding protein (tbpA) ,
pH-inducible protein involved in stress response (inaA) ,
MrcB subunit of 5-methylcytosine restriction system (mcrB) ,
predicted transporter subunit: membrane component of ABC superfamily (yhhJ) ,
YbhS ,
YbhR ,
YadH ,
topoisomerase IV subunit A (parC) ,
bacteriophage N4 receptor, inner membrane subunit (nfrB) ,
YpdA sensory histidine kinase ,
ModE ,
EF-P-lysine lysyltransferase (epmA) ,
GroES cochaperonin (groS) ,
chaperone protein DnaJ ,
RcsD phosphotransferase ,
nucleotide binding filament protein (uspF) ,
cellulose biosynthesis protein, pseudogene lacking N-terminal amino acids (bcsQ) ,
zinc, cadmium and lead efflux system (zntA) ,
NAD(P)HX epimerase / NAD(P)HX dehydratase (yjeF) ,
NarQ ,
stationary-phase protein with possible role in p-aminobenzoate or folate biosynthesis (fic) ,
RstB sensory histidine kinase ,
NtrB (glnL) ,
NarX ,
nucleotide binding protein (yajQ) ,
RecC ,
MalT-Maltotriose-ATP DNA-binding transcriptional activator ,
AtoS sensory histidine kinase - phosphorylated ,
essential cell division protein FtsA ,
tRNAMet cytidine acetyltransferase (tmcA) ,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase ,
nucleoside triphosphate pyrophosphohydrolase (mazG) ,
RNase III (rnc) ,
ThiI ,
ThiS adenylyltransferase (thiF) ,
GTPase associated with the 50S subunit of the ribosome (hflX) ,
molybdopterin-synthase adenylyltransferase (moeB) ,
MogA ,
RecBCD ,
glutamate-putrescine ligase (puuA) ,
propionyl-CoA synthetase (prpE) ,
citrate lyase synthetase (citC) ,
glycerate kinase II (glxK) ,
triphosphoribosyl-dephospho-CoA synthase (citG) ,
fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (rfaE) ,
ThiD ,
lipid kinase (yegS) ,
protein-tyrosine kinase (wzc) ,
phenylacetate-CoA ligase (paaK) ,
thiamin kinase (thiK) ,
HisG ,
RNA 3'-terminal phosphate cyclase (rtcA) ,
fructoselysine 6-kinase (frlD) ,
autophosphorylating protein tyrosine kinase (etk) ,
L-xylulose kinase (lyxK) ,
2-keto-3-deoxygluconokinase (kdgK) ,
MenE ,
dihydroxyacetone kinase subunit M (dhaM) ,
predicted carbamate kinase (ybcF) ,
2-dehydro-3-deoxygalactonate kinase (dgoK) ,
glutamine synthetase adenylyltransferase / glutamine synthetase deadenylase (glnE) ,
predicted pseudouridine kinase (psuK) ,
acetyl-CoA synthetase (AMP-forming) (acs) ,
lipopolysaccharide core heptose (II) kinase (waaY) ,
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (folK) ,
sulfate adenylyltransferase, CysN subunit ,
glycerate kinase I (garK) ,
AsnB ,
pyruvate kinase II monomer (pykA) ,
sulfate adenylyltransferase, CysD subunit ,
propionate kinase (tdcD) ,
L-fuculokinase (fucK) ,
apo-serine activating enzyme (entF) ,
EntE ,
thiamin monophosphate kinase (thiL) ,
bifunctional riboflavin kinase / FMN adenylyltransferase (ribF) ,
GDP pyrophosphokinase / GTP pyrophosphokinase (relA) ,
1-phosphofructokinase monomer (fruK) ,
Gsk ,
Gss ,
pyruvate kinase I monomer (pykF) ,
DgkA ,
poly(A) polymerase I (pcnB) ,
acetyl-CoA carboxyltransferase, α subunit (accA) ,
acetyl-CoA carboxyltransferase, β subunit (accD) ,
ribokinase (rbsK) ,
GlnA ,
PyrG ,
ProB ,
NAD kinase monomer (nadK) ,
Ppk ,
nicotinate-mononucleotide adenylyltransferase (nadD) ,
ribose-phosphate diphosphokinase (prs) ,
γ-glutamate-cysteine ligase (gshA) ,
GlgC ,
pantetheine-phosphate adenylyltransferase monomer (coaD) ,
acetate kinase (ackA) ,
xylulokinase (xylB) ,
LysC ,
L-ribulokinase monomer (araB) ,
PurM ,
6-phosphofructokinase-2 monomer (pfkB) ,
phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase (hisI) ,
bifunctional biotin-[acetyl-CoA-carboxylase] ligase and transcriptional repressor (birA) ,
K+ transporting ATPase - KdpC subunit ,
K+ transporting ATPase - K+ channel forming subunit (kdpA) ,
adenylate cyclase (cyaA) ,
MetL ,
ThrA ,
protein involved in synthesis of threonylcarbamoyladenosine-modified tRNA (tsaC) ,
serine/threonine kinase HipA ,
L-rhamnulose kinase (rhaB) ,
UMP kinase (pyrH) ,
lipoyl-protein ligase A (lplA) ,
manno(fructo)kinase (mak) ,
tRNA C32 thiolase (ttcA) ,
GroEL chaperonin (groL) ,
tRNA-specific 2-thiouridylase (mnmA) ,
D-allose kinase (alsK) ,
galactofuranose / galactopyranose ABC transporter - putative ATP binding subunit (ytfR) ,
Cu+ efflux ATPase (copA) ,
taurine ABC transporter - ATP binding subunit (tauB) ,
predicted protein with nucleoside triphosphate hydrolase domain (yghT) ,
predicted protein with nucleoside triphosphate hydrolase domain (yghS) ,
putative transcriptional regulator (ygeV) ,
AtoS ,
AtoC transcriptional activator; Az protein inhibitor of ODC ,
YdcT ,
7-cyano-7-deazaguanine synthase (queC) ,
PrpR DNA-binding transcriptional dual regulator ,
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppF) ,
YddO (ddpF) ,
anhydro-N-acetylmuramic acid kinase (anmK) ,
DpiB sensory histidine kinase ,
YphE ,
SufC component of SufBCD Fe-S cluster scaffold complex ,
CusS sensory histidine kinase ,
predicted sugar transporter subunit: ATP-binding component of ABC superfamily (ycjV) ,
Hsc62, Hsp70 family chaperone, binds to RpoD and inhibits transcription (hscC) ,
ABC transporter with a role in iron homeostasis - ATP-binding subunit (fetA) ,
YddP (ddpD) ,
predicted multidrug transporter subunit of ABC superfamily: ATP-binding component (mdlA) ,
AI-2 ABC transporter - ATP binding subunit (lsrA) ,
carboxylate-amine ligase (ybdK) ,
pyridoxal kinase 2 (pdxY) ,
YnjD ,
conserved protein with nucleoside triphosphate hydrolase domain (eutP) ,
hydroxyethylthiazole kinase (thiM) ,
predicted sensory kinase in two-component regulatory system with YedW (yedV) ,
conserved protein (yoaA) ,
conserved protein (ycjX) ,
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppD) ,
DhaR DNA-binding transcriptional dual regulator ,
dihydroxyacetone kinase subunit L (dhaL) ,
N-acetyl-D-glucosamine kinase (nagK) ,
LolD ,
MacAB-TolC macrolide efflux transport system - membrane subunit (macB) ,
conserved protein with a nucleotide triphosphate hydrolase domain (ybjD) ,
glutathione ABC transporter - ATP binding subunit (gsiA) ,
HyfR DNA-binding transcriptional activator ,
putrescine / spermidine ABC transporter - ATP binding subunit (potA) ,
FadD ,
adenylate kinase (adk) ,
maltose ABC transporter - ATP binding subunit (malK) ,
predicted cobalamine adenosyltransferase in ethanolamine utilization (eutT) ,
cell division factor ZapE with ATPase activity ,
predicted protein with nucleoside triphosphate hydrolase domain (yghR) ,
fused predicted transporter subunits of ABC superfamily: ATP-binding components (yheS) ,
MlaF ,
ClpB chaperone ,
IspE ,
histidyl-tRNA synthetase (hisS) ,
ATP-binding lipopolysaccharide transport protein (msbA) ,
guanylate kinase (gmk) ,
RNA Polymerase (RNAP)-binding ATPase and RNAP recycling factor (hepA) ,
flagellum-specific ATP synthase FliI ,
GlrK sensory histidine kinase ,
tRNAIle-lysidine synthetase (tilS) ,
predicted transporter (yggR) ,
essential cell division protein FtsK ,
GntK ,
YhdZ ,
putative protein secretion protein for export (gspE) ,
general secretory pathway component, cryptic (gspA) ,
N-acetylmannosamine kinase (nanK) ,
ATP-binding protein with possible role in replication (uup) ,
ATP-dependent helicase (hrpA) ,
QseC sensory histidine kinase ,
PdxK ,
TorS monomer ,
NrdE ,
D-gluconate kinase, thermosensitive (idnK) ,
short chain acyl-CoA synthetase (fadK) ,
protein involved in CRISPR R-loop formation and dissociation (cas3) ,
RtcR DNA-binding transcriptional activator ,
predicted transporter subunit: ATP-binding component of ABC superfamily (yecC) ,
UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminoheptanedioate-D-alanine ligase [multifunctional] (mpl) ,
ribosome-associated ATPase (rbbA) ,
xylose ABC transporter - ATP binding subunit (xylG) ,
PspF transcriptional dual regulator ,
dipeptide ABC transporter - putative ABC binding subunit (dppF) ,
predicted ATP-dependent helicase (hrpB) ,
NorR DNA-binding transcriptional dual regulator ,
CP4-6 prophage; predicted ferric transporter subunit/ATP-binding component of ABC superfamily (afuC) ,
actin family protein (yegD) ,
YadG ,
protein involved in plasmid replication (hofB) ,
fused predicted multidrug transport subunits of ABC superfamily: membrane component / ATP-binding component (yojI) ,
peptide ABC transporter - ATP binding subunit (yejF) ,
nickel ABC transporter - ATP binding subunit (nikE) ,
nickel ABC transporter - ATP binding subunit (nikD) ,
YehX ,
phosphoribosylglycinamide formyltransferase 2 (purT) ,
D-allose ABC transporter - ATP binding subunit (alsA) ,
fused predicted multidrug transporter subunits of ABC superfamily: membrane component, ATP-binding component (yddA) ,
NarP ,
pantothenate synthetase monomer (panC) ,
thiamin ABC transporter - ATP binding subunit (thiQ) ,
regulatory ATPase (ravA) ,
putrescine ABC transporter - ATP binding subunit (potG) ,
2-acylglycerophosphoethanolamine acyltransferase / acyl-ACP synthetase (aas) ,
ModF ,
transcription-repair coupling factor (mfd) ,
EvgS sensory histidine kinase ,
BaeS sensory histidine kinase ,
BasS sensory histidine kinase ,
BasS sensory histidine kinase - phosphorylated ,
L-methionine / D-methionine ABC transporter - ATP binding subunit (metN) ,
member of ATP-dependent helicase superfamily II (lhr) ,
glutathione / L-cysteine efflux transporter - CydD subunit ,
ribonucleoside-triphosphate reductase (nrdD) ,
glutamyl-Q tRNAAsp synthetase (gluQ) ,
tetraacyldisaccharide 4'-kinase (lpxK) ,
conserved protein (bax) ,
ATP-dependent helicase (dinG) ,
GTPase that interacts with methylmalonyl-CoA mutase (argK) ,
ATP-dependent RNA helicase (rhlE) ,
lipopolysaccharide core heptose (I) kinase (waaP) ,
DNA recombination protein (radA) ,
RecG DNA helicase ,
AccC ,
MutS ,
glutathione / L-cysteine efflux transporter - CydC subunit ,
ferric enterobactin ABC transporter - ATP binding subunit (fepC) ,
PhoQ sensory histidine kinase ,
phosphoenolpyruvate synthetase (ppsA) ,
MutL ,
thymidine kinase / deoxyuridine kinase (tdk) ,
branched chain amino acid ABC transporter - ATP binding subunit (livF) ,
cell division protein involved in chromosome partitioning (mukB) ,
phosphoenolpyruvate carboxykinase (ATP) (pck) ,
UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase (murE) ,
aspartyl-tRNA synthetase (aspS) ,
cysteinyl-tRNA synthetase (cysS) ,
KdpD ,
ATP-dependent RNA helicase, specific for 23S rRNA (dbpA) ,
SrmB, DEAD-box RNA helicase ,
topoisomerase IV subunit B (parE) ,
FhlA transcriptional activator ,
NadE ,
UDP-N-acetylmuramate-alanine ligase (murC) ,
primosome factor N' (priA) ,
D-arabinose 5-phosphate isomerase (gutQ) ,
ribose 1,5-bisphosphokinase (phnN) ,
PhnL subunit of methylphosphonate degradation complex ,
predicted carbon-phosphorous lyase subunit (phnK) ,
phosphonate ABC transporter - ATP binding subunit (phnC) ,
sulfate / thiosulfate ABC transporter - ATP binding subunit (cysA) ,
prolyl-tRNA synthetase (proS) ,
selenide, water dikinase (selD) ,
tRNA(i6A37) synthase (miaA) ,
phosphoribosylamine-glycine ligase (purD) ,
phosphoribosylformylglycinamide synthetase (purL) ,
ATP-dependent DNA helicase (recQ) ,
DNA helicase IV (helD) ,
ferric dicitrate ABC transporter - ATP binding subunit (fecE) ,
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (murD) ,
ZraS sensory histidine kinase ,
ZraR transcriptional activator ,
glycine betaine / proline ABC transporter - ATP binding subunit (proV) ,
ATP-dependent dsDNA exonuclease (sbcC) ,
dethiobiotin synthetase monomer (bioD) ,
D-alanyl-D-alanine-adding enzyme (murF) ,
arginyl-tRNA synthetase (argS) ,
conserved protein with nucleoside triphosphate hydrolase domain (yggC) ,
AceK ,
glycerol-3-phosphate ABC transporter - ATP binding subunit (ugpC) ,
SecA ,
glutamine ABC transporter - ATP binding subunit (glnQ) ,
ribosomal protein S6 modification protein (rimK) ,
tyrosyl-tRNA synthetase (tyrS) ,
succinyl-CoA synthetase, α subunit (sucD) ,
transcription termination factor Rho monomer; polarity suppressor ,
GlrR DNA-binding transcriptional activator ,
NtrC transcriptional dual regulator (glnG) ,
NarL ,
putative ATPase (mrp) ,
membrane ATPase of the MinC-MinD-MinE system that regulates septum placement ,
predicted phosphoribulokinase (prkB) ,
DNA gyrase, subunit B (gyrB) ,
DNA gyrase, subunit A ,
EnvZ ,
chromosome replication; initiation and chain elongation (dnaC) ,
DcuS sensory histidine kinase ,
BarA sensory histidine kinase ,
ArcB sensory histidine kinase ,
CpxA sensory histidine kinase ,
CobU ,
YehU sensory histidine kinase ,
predicted epimerase, with NAD(P)-binding Rossmann-fold domain (yeeZ) ,
DnaB ,
5-formyltetrahydrofolate cyclo-ligase (fau) ,
ClpA ,
Mg2+ / Ni2+ transporting ATPase (mgtA) ,
ATP synthase F1 complex - beta subunit (atpD) ,
ATP synthase F1 complex - alpha subunit (atpA) ,
recombination factor (rarA) ,
ATP-dependent zinc metalloprotease FtsH ,
aliphatic sulfonate ABC transporter - ATP binding subunit (ssuB) ,
ATP binding protein SapF of predicted ABC transporter ,
ATP binding protein implicated in Trk mediated K+ uptake (sapD) ,
phosphate ABC transporter - ATP binding subunit (pstB) ,
galactose ABC transporter - ATP binding subunit (mglA) ,
predicted multidrug transporter subunit of ABC superfamily: ATP-binding component (mdlB) ,
dipeptide ABC transporter - putative ATP binding subunit (dppD) ,
L-arginine ABC transporter - ATP binding subunit (artP) ,
arabinose ABC transporter - ATP binding subunit (araG) ,
Zn2+ ABC transporter - ATP binding subunit (znuC) ,
energy-dependent translational throttle protein (ettA) ,
LptB ,
putative ATP-binding component of a transport system (ybiT) ,
YbhF ,
YbbA ,
branched chain amino acid transporter - ATP binding subunit (livG) ,
cell division protein FtsE ,
DeaD, DEAD-box RNA helicase ,
Lon ,
predicted protein with nucleoside triphosphate hydrolase domain (ybeZ) ,
ATP-binding protein (phoH) ,
cobinamide adenosyltransferase / cobalamin adenosyltransferase (btuR) ,
lysyl-tRNA synthetase (lysU) ,
lysyl tRNA synthetase (LysRSs), constitutive (lysS) ,
threonyl-tRNA synthetase (thrS) ,
asparaginyl-tRNA synthetase (asnS) ,
seryl-tRNA synthetase (serS) ,
RhlB ,
DNA repair; excision nuclease subunit B (uvrB) ,
uridine kinase / cytidine kinase (udk) ,
NrdR ,
PEP synthetase regulatory protein (ppsR) ,
RNase adaptor protein (rapZ) ,
succinyl-CoA synthetase, β subunit ,
methionine adenosyltransferase (metK) ,
branch migration of Holliday structures; repair helicase (ruvB) ,
branch migration of Holliday structures; repair (ruvA) ,
ssDNA and dsDNA binding, ATP binding (recF) ,
DNA strand exchange and recombination protein with protease and nuclease activity (recA) ,
PurC ,
phosphoglycerate kinase (pgk) ,
6-phosphofructokinase-1 monomer (pfkA) ,
Ndk ,
dTMP kinase (tmk) ,
HtpG monomer ,
chaperone for [Fe-S] cluster biosynthesis (hscA) ,
chaperone protein DnaK ,
glucokinase (glk) ,
galactokinase (galK) ,
D-alanine-D-alanine ligase A (ddlA) ,
CysC ,
dephospho-CoA kinase (coaE) ,
pantothenate kinase monomer (coaA) ,
cytidylate kinase (cmk) ,
ATPase component of the HslVU protease (hslU) ,
ClpX ,
GlpK ,
carbamoyl phosphate synthetase, α chain (carA) ,
predicted dethiobiotin synthetase (ynfK) ,
ArgG ,
shikimate kinase II (aroL) ,
shikimate kinase I (aroK) ,
acetylglutamate kinase monomer (argB) ,
excision nuclease subunit A (uvrA) ,
rep ,
UhpB sensory histidine kinase ,
molybdate ABC transporter - ATP binding subunit (modC) ,
N5-carboxyaminoimidazole ribonucleotide synthetase monomer (purK) ,
host restriction; endonuclease R (hsdR) ,
CreC ,
PhoR ,
RecB ,
phenylalanyl-tRNA synthetase α-chain (pheS) ,
bifunctional folylpolyglutamate synthetase / dihydrofolate synthetase (folC) ,
D-alanine-D-alanine ligase B (ddlB) ,
iron (III) hydroxamate ABC transporter - ATP binding subunit (fhuC) ,
leucyl-tRNA synthetase (leuS) ,
TyrR DNA-binding transcriptional dual regulator ,
phenylalanyl-tRNA synthetase β-chain (pheT) ,
CheA ,
valyl-tRNA synthetase (valS) ,
lysine / arginine / ornithine ABC transporter / histidine ABC transporter - ATP binding subunit (hisP) ,
MalT transcriptional activator ,
fused tRNA nucleotidyltransferase / 2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase (cca) ,
DNA polymerase III, τ subunit (dnaX) ,
vitamin B12 ABC transporter - ATP binding subunit (btuD) ,
protein used in recombination and DNA repair (recN) ,
RecD ,
ribose ABC transporter - putative ATP binding subunit (rbsA) ,
glutamyl-tRNA synthetase (gltX) ,
glutathione synthetase monomer (gshB) ,
GMP synthetase (guaA) ,
K+ transporting ATPase - ATP binding subunit (kdpB) ,
UvrD ,
chromosomal replication initiator protein DnaA; DNA-binding transcriptional dual regulator ,
carbamoyl phosphate synthetase, β chain ,
AsnA ,
glutaminyl-tRNA synthetase (glnS) ,
glycyl-tRNA synthetase, β subunit (glyS) ,
glycyl-tRNA synthetase, α subunit (glyQ) ,
methionyl-tRNA synthetase (metG) ,
alanyl-tRNA synthetase (alaS) ,
isoleucyl-tRNA synthetase (ileS) ,
tryptophanyl-tRNA synthetase (trpS) ,
ThrB ,
ribonucleoside diphosphate reductase 1, α subunit (nrdA) ,
protoheme IX ABC transporter - ATP binding subunit (ccmA) ,
glutamate / aspartate ABC transporter - ATP binding subunit (gltL)

Unification Links: GO:0005524


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Thu Dec 25, 2014, BIOCYC13B.