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Metabolic Modeling Tutorial
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Escherichia coli K-12 substr. MG1655 All-Genes Class: Cryptic-Genes

Summary:
A cryptic gene is a pseudogene that is not functional because it is not expressed. Therefore, cryptic genes should not have products defined within the PGDB.

Parent Classes:
Pseudo-Genes

Instances:
agaB (galactosamine PTS permease (cryptic) - AgaB subunit) ,
agaC (galactosamine PTS permease (cryptic) - AgaC subunit) ,
agaD (galactosamine PTS permease (cryptic) - AgaD subunit) ,
ascF ,
ebgA (evolved β-D-galactosidase, α subunit; cryptic gene) ,
ebgC (evolved β-D-galactosidase, β subunit; cryptic gene) ,
ecpA (E. coli common pilus - major subunit; cryptic) ,
ecpB (E. coli common pilus chaperone - cryptic) ,
ecpC (outer membrane protein associated with E. coli common pilus formation - cryptic) ,
ecpD (polymerized tip adhesin of E. coli common pilus - cryptic) ,
ecpE (E. coli common pilus chaperone - cryptic) ,
gspA (general secretory pathway component, cryptic) ,
gspC (putative protein secretion protein for export) ,
gspD (putative protein secretion protein for export) ,
gspE (putative protein secretion protein for export) ,
gspF (putative protein secretion protein for export) ,
gspG (putative protein secretion protein for export) ,
gspH (putative protein secretion protein for export) ,
gspI (putative protein secretion protein for export) ,
gspJ (putative protein secretion protein for export) ,
gspK (putative protein secretion protein for export) ,
gspL (putative protein secretion protein for export) ,
gspM (putative protein secretion protein)


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Wed Nov 26, 2014, biocyc14.