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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
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for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
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Escherichia coli K-12 substr. MG1655 All-Genes Class: DNA repair

Parent Classes:
DNA related

Instances:
ada (Ada DNA-binding transcriptional dual regulator) ,
alkA (3-methyl-adenine DNA glycosylase II, inducible) ,
alkB (AlkB repair system for alkylated DNA and RNA) ,
atl (DNA base-flipping protein) ,
cas1 (multifunctional nuclease) ,
cho (endonuclease of nucleotide excision repair) ,
dinD (DNA-damage-inducible protein) ,
dinF (DinF MATE Transporter) ,
dinG (ATP-dependent helicase) ,
dinI (DNA damage-inducible protein I) ,
exoX (exonuclease X) ,
gph (phosphoglycolate phosphatase) ,
lexA ,
ligA (DNA ligase) ,
mug (stationary phase mismatch/uracil DNA glycosylase) ,
mutH ,
mutL ,
mutM (formamidopyrimidine DNA glycosylase) ,
mutS ,
mutY (adenine glycosylase; G.C --> T.A transversions) ,
nei (endonuclease VIII) ,
phr (deoxyribodipyrimidine photolyase (photoreactivation)) ,
polB (DNA polymerase II) ,
radA (DNA recombination protein) ,
recA (DNA strand exchange and recombination protein with protease and nuclease activity) ,
recB ,
recC ,
recE (exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific) ,
recF (ssDNA and dsDNA binding, ATP binding) ,
recN (protein used in recombination and DNA repair) ,
recO (protein interacts with RecR and possibly RecF proteins) ,
recQ (ATP-dependent DNA helicase) ,
recR (recombination and repair) ,
recX (regulatory protein RecX; inhibitor of RecA) ,
rusA (endodeoxyribonuclease RUS (Holliday junction resolvase)) ,
ruvA (branch migration of Holliday structures; repair) ,
ruvB (branch migration of Holliday structures; repair helicase) ,
ruvC (Holliday junction nuclease; resolution of structures; repair) ,
sbmC (DNA gyrase inhibitor) ,
sulA (SOS cell division inhibitor) ,
tag (3-methyl-adenine DNA glycosylase I, constitutive) ,
umuC (SOS mutagenesis and repair) ,
umuD (SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC) ,
ung (uracil-DNA glycosylase) ,
uvrA (excision nuclease subunit A) ,
uvrB (DNA repair; excision nuclease subunit B) ,
uvrC (excinuclease ABC, subunit C; repair of UV damage to DNA) ,
uvrD ,
vsr (DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway) ,
xseB (exonuclease VII, small subunit) ,
ybcN (DLP12 prophage; DNA base-flipping protein) ,
yebG (conserved protein regulated by LexA)


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sun Dec 21, 2014, BIOCYC13B.