Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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Escherichia coli K-12 substr. MG1655 All-Genes Class: aerobic respiration

Parent Classes:
energy metabolism, carbon

Instances:
arcB (ArcB sensory histidine kinase - his292 phosphorylated) ,
cyoA (cytochrome bo terminal oxidase subunit II) ,
cyoB (cytochrome bo terminal oxidase subunit I) ,
cyoC (cytochrome bo terminal oxidase subunit III) ,
cyoD (cytochrome bo terminal oxidase subunit IV) ,
cyoE (heme O synthase) ,
dld (D-lactate dehydrogenase) ,
erpA (essential respiratory protein A) ,
fldB (oxidized flavodoxin 2) ,
frsA (fermentation/respiration switch protein) ,
glpD ,
glpT (glycerol-3-phosphate:phosphate antiporter) ,
hyaA (hydrogenase 1, small subunit) ,
hyaB (hydrogenase 1, large subunit) ,
hyaC (hydrogenase 1, b-type cytochrome subunit) ,
hyaD (protein involved in processing of HyaA and HyaB proteins) ,
hyaE (protein involved in quality control of HyaA) ,
hyaF (protein involved in nickel incorporation into hydrogenase 1 proteins) ,
lldD (L-lactate dehydrogenase) ,
lldR (LldR transcriptional repressor) ,
ndh (NADH:ubiquinone oxidoreductase II) ,
nikD (nickel ABC transporter - ATP binding subunit) ,
nikE (nickel ABC transporter - ATP binding subunit) ,
nuoA (NADH:ubiquinone oxidoreductase, membrane subunit A) ,
nuoB (NADH:ubiquinone oxidoreductase, chain B) ,
nuoC (NADH:ubiquinone oxidoreductase, chain CD) ,
nuoE (NADH:ubiquinone oxidoreductase, chain E) ,
nuoF (NADH:ubiquinone oxidoreductase, chain F) ,
nuoG (NADH:ubiquinone oxidoreductase, chain G) ,
nuoH (NADH:ubiquinone oxidoreductase, membrane subunit H) ,
nuoI (NADH:ubiquinone oxidoreductase, chain I) ,
nuoJ (NADH:ubiquinone oxidoreductase, membrane subunit J) ,
nuoK (NADH:ubiquinone oxidoreductase, membrane subunit K) ,
nuoL (NADH:ubiquinone oxidoreductase, membrane subunit L) ,
nuoM (NADH:ubiquinone oxidoreductase, membrane subunit M) ,
nuoN (NADH:ubiquinone oxidoreductase, membrane subunit N) ,
sdhA (succinate:quinone oxidoreductase, FAD binding protein) ,
sdhB (succinate:quinone oxidoreductase, iron-sulfur cluster binding protein) ,
sdhC (succinate:quinone oxidoreductase, membrane protein SdhC) ,
sdhD (succinate:quinone oxidoreductase, membrane protein SdhC) ,
ubiA (4-hydroxybenzoate octaprenyltransferase) ,
ubiB (predicted protein kinase involved in ubiquinone biosynthesis) ,
ubiE (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase) ,
ubiG ,
ubiH (2-octaprenyl-6-methoxyphenol hydroxylase) ,
ubiX (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG) ,
ugpA (glycerol-3-phosphate ABC transporter - membrane subunit) ,
ugpB (glycerol-3-phosphate ABC transporter - periplasmic binding protein) ,
ugpC (glycerol-3-phosphate ABC transporter - ATP binding subunit) ,
ugpE (glycerol-3-phosphate ABC transporter - membrane subunit)


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Mon Dec 22, 2014, BIOCYC13B.